Large-scale compensation of errors in pairwise-additive empirical force fields: comparison of AMBER intermolecular terms with rigorous DFT-SAPT calculations

被引:79
作者
Zgarbova, Marie [1 ]
Otyepka, Michal [1 ]
Sponer, Jiri [1 ,2 ]
Hobza, Pavel [1 ,3 ,4 ]
Jurecka, Petr [1 ,3 ,4 ]
机构
[1] Palacky Univ, Dept Phys Chem, Olomouc 77146, Czech Republic
[2] Acad Sci Czech Republ, Inst Biophys, CS-61265 Brno, Czech Republic
[3] Ctr Biomol & Complex Mol Syst, Prague 16610 6, Czech Republic
[4] Acad Sci Czech Republ, Inst Organ Chem & Biochem, CR-16610 Prague 6, Czech Republic
关键词
DENSITY-FUNCTIONAL THEORY; NUCLEIC-ACID BASE; INTERACTION ENERGIES; MOLECULAR-MECHANICS; STACKED STRUCTURES; QUANTUM-MECHANICS; COMPLEXES; DYNAMICS; MODEL; DNA;
D O I
10.1039/c002656e
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
The intermolecular interaction energy components for several molecular complexes were calculated using force fields available in the AMBER suite of programs and compared with Density Functional Theory-Symmetry Adapted Perturbation Theory (DFT-SAPT) values. The extent to which such comparison is meaningful is discussed. The comparability is shown to depend strongly on the intermolecular distance, which means that comparisons made at one distance only are of limited value. At large distances the coulombic and van der Waals 1/r(6) empirical terms correspond fairly well with the DFT-SAPT electrostatics and dispersion terms, respectively. At the onset of electronic overlap the empirical values deviate from the reference values considerably. However, the errors in the force fields tend to cancel out in a systematic manner at equilibrium distances. Thus, the overall performance of the force fields displays errors an order of magnitude smaller than those of the individual interaction energy components. The repulsive 1/r(12) component of the van der Waals expression seems to be responsible for a significant part of the deviation of the force field results from the reference values. We suggest that further improvement of the force fields for intermolecular interactions would require replacement of the nonphysical 1/r(12) term by an exponential function. Dispersion anisotropy and its effects are discussed. Our analysis is intended to show that although comparing the empirical and non-empirical interaction energy components is in general problematic, it might bring insights useful for the construction of new force fields. Our results are relevant to often performed force-field-based interaction energy decompositions.
引用
收藏
页码:10476 / 10493
页数:18
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