Transport properties controlled by a thermostat: An extended dissipative particle dynamics thermostat

被引:121
作者
Junghans, Christoph [1 ]
Praprotnik, Matej [1 ,2 ]
Kremer, Kurt [1 ]
机构
[1] Max Planck Inst Polymer Res, D-55128 Mainz, Germany
[2] Natl Inst Chem, SI-1001 Ljubljana, Slovenia
关键词
D O I
10.1039/b713568h
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
We introduce a variation of the dissipative particle dynamics (DPD) thermostat that allows for controlling transport properties of molecular fluids. The standard DPD thermostat acts only on a relative velocity along the interatomic axis. Our extension includes the damping of the perpendicular components of the relative velocity, whilst keeping the advantages of conserving Galilei invariance and within our error bar also hydrodynamics. This leads to a second friction parameter for tuning the transport properties of the system. Numerical simulations of a simple Lennard-Jones fluid and liquid water demonstrate a very sensitive behaviour of the transport properties, e. g., viscosity, on the strength of the new friction parameter. We envisage that the new thermostat will be very useful for the coarse-grained and adaptive resolution simulations of soft matter, where the diffusion constants and viscosities of the coarse-grained models are typically too high/low, respectively, compared to all-atom simulations.
引用
收藏
页码:156 / 161
页数:6
相关论文
共 56 条
[1]   MOLECULAR-DYNAMICS SIMULATIONS AT CONSTANT PRESSURE AND-OR TEMPERATURE [J].
ANDERSEN, HC .
JOURNAL OF CHEMICAL PHYSICS, 1980, 72 (04) :2384-2393
[2]  
[Anonymous], 2006, PHYS REV LETT
[3]   Comparison of molecular dynamics with hybrid continuum-molecular dynamics for a single tethered polymer in a solvent [J].
Barsky, S ;
Delgado-Buscalioni, R ;
Coveney, PV .
JOURNAL OF CHEMICAL PHYSICS, 2004, 121 (05) :2403-2411
[4]   MOLECULAR-DYNAMICS WITH COUPLING TO AN EXTERNAL BATH [J].
BERENDSEN, HJC ;
POSTMA, JPM ;
VANGUNSTEREN, WF ;
DINOLA, A ;
HAAK, JR .
JOURNAL OF CHEMICAL PHYSICS, 1984, 81 (08) :3684-3690
[5]   THEORY OF ACTIVATED RATE-PROCESSES - POSITION DEPENDENT FRICTION [J].
CARMELI, B ;
NITZAN, A .
CHEMICAL PHYSICS LETTERS, 1983, 102 (06) :517-522
[6]   Fluctuations and continuity in particle-continuum hybrid simulations of unsteady flows based on flux-exchange [J].
Delgado-Buscalioni, R ;
Flekkoy, EG ;
Coveney, PV .
EUROPHYSICS LETTERS, 2005, 69 (06) :959-965
[7]   Continuum-particle hybrid coupling for mass, momentum, and energy transfers in unsteady fluid flow [J].
Delgado-Buscalioni, R ;
Coveney, PV .
PHYSICAL REVIEW E, 2003, 67 (04) :13-467041
[8]   Polymers near metal surfaces: Selective adsorption and global conformations [J].
Delle Site, L ;
Abrams, CF ;
Alavi, A ;
Kremer, K .
PHYSICAL REVIEW LETTERS, 2002, 89 (15) :156103/1-156103/4
[9]  
DUNWEG B, 1993, J CHEM PHYS, V99, P6983, DOI 10.1063/1.465445
[10]  
EFRON E, 1982, JACKKNIFE BOOTSTRAP