Protein complexes in the gas phase: Technology for structural genomics and proteomics

被引:344
作者
Benesch, Justin L. P. [1 ]
Ruotolo, Brandon T. [1 ]
Simmons, Douglas A. [1 ]
Robinson, Carol V. [1 ]
机构
[1] Univ Cambridge, Dept Chem, Cambridge CB2 1EW, England
关键词
D O I
10.1021/cr068289b
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
A review on the application of mass spectrometry (MS) to the upper levels of protein organization is presented. A description on the processes of generating, transmitting, and analyzing ions formed by protein complexes is presented as well as the experimental conditions theory that are the standards for the investigations. In addition, some other approaches are included that can be used in conjunction with MS of intact complexes. This review aims to establish MS of intact complexes as part of future structural genomic and proteomic investigations. Several other topics discussed include the generation of ions of protein complexes, the transmission and analysis of ions o protein complexes, the activation and dissociation of protein complexes, and lastly, the companion technologies for MS of protein complexes.
引用
收藏
页码:3544 / 3567
页数:24
相关论文
共 278 条
[91]   Anhydrous protein ions [J].
Hoaglund-Hyzer, CS ;
Counterman, AE ;
Clemmer, DE .
CHEMICAL REVIEWS, 1999, 99 (10) :3037-3079
[92]   The role of protein dynamics in increasing binding affinity for an engineered protein-protein interaction established by H/D exchange mass spectrometry [J].
Horn, James R. ;
Kraybill, Brian ;
Petro, Elizabeth J. ;
Coales, Stephen J. ;
Morrow, Jeffrey A. ;
Hamuro, Yoshitomo ;
Kossiakoff, Anthony A. .
BIOCHEMISTRY, 2006, 45 (28) :8488-8498
[93]   Localization of noncovalent complexes in MALDI-preparations by CLSM [J].
Horneffer, Verena ;
Strupat, Kerstin ;
Hillenkamp, Franz .
JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY, 2006, 17 (11) :1599-1604
[94]   Pulsed hydrogen/deuterium exchange MS/MS for studying the relationship between noncovalent protein complexes in solution and in the gas phase after electrospray ionization [J].
Hossain, BM ;
Konermann, L .
ANALYTICAL CHEMISTRY, 2006, 78 (05) :1613-1619
[95]   The Orbitrap: a new mass spectrometer [J].
Hu, QZ ;
Noll, RJ ;
Li, HY ;
Makarov, A ;
Hardman, M ;
Cooks, RG .
JOURNAL OF MASS SPECTROMETRY, 2005, 40 (04) :430-443
[96]   APPLICATION OF ELECTROSPRAY MASS-SPECTROMETRY IN PROBING PROTEIN-PROTEIN AND PROTEIN LIGAND NONCOVALENT INTERACTIONS [J].
HUANG, EC ;
PRAMANIK, BN ;
TSARBOPOULOS, A ;
REICHERT, P ;
GANGULY, AK ;
TROTTA, PP ;
NAGABHUSHAN, TL ;
COVEY, TR .
JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY, 1993, 4 (08) :624-630
[97]   The identification of protein-protein interactions of the nuclear pore complex of Saccharomyces cerevisiae using high throughput matrix-assisted laser desorption ionization time-of-flight tandem mass spectrometry [J].
Huang, L ;
Baldwin, MA ;
Maltby, DA ;
Medzihradszky, KF ;
Baker, PR ;
Allen, N ;
Rexach, M ;
Edmondson, RD ;
Campbell, J ;
Juhasz, P ;
Martin, SA ;
Vestal, ML ;
Burlingame, AL .
MOLECULAR & CELLULAR PROTEOMICS, 2002, 1 (06) :434-450
[98]   Heptameric (L12)6/L10 rather than canonical pentameric complexes are found by tandem MS of intact ribosomes from thermophilic bacteria [J].
Ilag, LL ;
Videler, H ;
McKay, AR ;
Sobott, F ;
Fucini, P ;
Nierhaus, KH ;
Robinson, CV .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2005, 102 (23) :8192-8197
[99]   On the evaporation of small ions from charged droplets [J].
IRIBARNE, JV ;
THOMSON, BA .
JOURNAL OF CHEMICAL PHYSICS, 1976, 64 (06) :2287-2294
[100]   Peptides and proteins in the vapor phase [J].
Jarrold, MF .
ANNUAL REVIEW OF PHYSICAL CHEMISTRY, 2000, 51 :179-207