Synthetic RNA circuits

被引:47
作者
Davidson, Eric A. [1 ]
Ellington, Andrew D. [1 ]
机构
[1] Univ Texas, Inst Cell & Mol Biol, Dept Chem & Biochem, Austin, TX 78712 USA
关键词
D O I
10.1038/nchembio846
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Natural and engineered RNA 'parts' can perform a variety of functions, including hybridizing to targets, binding ligands and undergoing programmed conformational changes, and catalyzing reactions. These RNA parts can in turn be assembled into synthetic genetic circuits that regulate gene expression by acting either in cis or in trans on mRNAs. As more parts are discovered and engineered, it should be increasingly possible to create synthetic RNA circuits that are able to carry out complex logical operations in cells, either superimposed on or autonomous to extant gene regulation.
引用
收藏
页码:23 / 28
页数:6
相关论文
共 82 条
  • [1] The SINE-encoded mouse B2 RNA represses mRNA transcription in response to heat shock
    Allen, TA
    Von Kaenel, S
    Goodrich, JA
    Kugel, JF
    [J]. NATURE STRUCTURAL & MOLECULAR BIOLOGY, 2004, 11 (09) : 816 - 821
  • [2] Artificial control of gene expression in mammalian cells by modulating RNA interference through aptamer-small molecule interaction
    An, CI
    Trinh, VB
    Yokobayashi, Y
    [J]. RNA, 2006, 12 (05) : 710 - 716
  • [3] Design and development of a catalytic ribonucleoprotein
    Atsumi, S
    Ikawa, Y
    Shiraishi, H
    Inoue, T
    [J]. EMBO JOURNAL, 2001, 20 (19) : 5453 - 5460
  • [4] Micromanagers of gene expression: the potentially widespread influence of metazoan microRNAs
    Bartel, DP
    Chen, CZ
    [J]. NATURE REVIEWS GENETICS, 2004, 5 (05) : 396 - 400
  • [5] Programmable ligand-controlled riboregulators of eukaryotic gene expression
    Bayer, TS
    Smolke, CD
    [J]. NATURE BIOTECHNOLOGY, 2005, 23 (03) : 337 - 343
  • [6] An autonomous molecular computer for logical control of gene expression
    Benenson, Y
    Gil, B
    Ben-Dor, U
    Adar, R
    Shapiro, E
    [J]. NATURE, 2004, 429 (6990) : 423 - 429
  • [7] Alternative splicing: New insights from global analyses
    Blencowe, Benjamin J.
    [J]. CELL, 2006, 126 (01) : 37 - 47
  • [8] Engineered allosteric ribozymes as biosensor components
    Breaker, RR
    [J]. CURRENT OPINION IN BIOTECHNOLOGY, 2002, 13 (01) : 31 - 39
  • [9] In vivo evolution of an RNA-based transcriptional activator
    Buskirk, AR
    Kehayova, PD
    Landrigan, A
    Liu, DR
    [J]. CHEMISTRY & BIOLOGY, 2003, 10 (06): : 533 - 540
  • [10] Engineering a ligand-dependent RNA transcriptional activator
    Buskirk, AR
    Landrigan, A
    Liu, DR
    [J]. CHEMISTRY & BIOLOGY, 2004, 11 (08): : 1157 - 1163