The proteomes of human parotid and submandibular/sublingual gland salivas collected as the ductal secretions

被引:297
作者
Denny, Paul [1 ]
Hagen, Fred K. [2 ]
Hardt, Markus [3 ]
Liao, Lujian [4 ]
Yan, Weihong [5 ]
Arellanno, Martha [9 ]
Bassilian, Sara
Bedi, Gurrinder S. [2 ]
Boontheung, Pinmannee [5 ]
Cociorva, Daniel [4 ]
Delahunty, Claire M. [4 ]
Denny, Trish [1 ]
Dunsmore, Jason
Faull, Kym F. [10 ]
Gilligan, Joyce [1 ]
Gonzalez-Begne, Mireya [2 ]
Halgand, Frederic [10 ]
Hall, Steven C. [3 ,8 ]
Han, Xuemei [4 ]
Henson, Bradley [9 ]
Hewel, Johannes
Hu, Shen
Jeffrey, Sherry [9 ]
Jiang, Jiang
Loo, Joseph A. [5 ,8 ,11 ]
Loo, Rachel R. Ogorzallek [8 ]
Malamud, Daniel [6 ]
Melvin, James E. [2 ]
Miroshnychenko, Olga [3 ]
Navazesh, Mahvash [1 ]
Niles, Richard [3 ]
Park, Sung Kyu
Prakobphol, Akraporn [3 ]
Ramachandran, Prasanna [5 ]
Richert, Megan [9 ]
Robinson, Sarah [3 ]
Sondej, Melissa [5 ]
Souda, Puneet [10 ]
Sullivan, Mark A. [2 ]
Takashima, Jona [1 ]
Than, Shawn [9 ]
Wang, Jianghua [9 ]
Whitelegge, Julian P. [10 ]
Witkowska, H. Ewa [3 ,8 ]
Wolinsky, Lawrence [9 ]
Xie, Yongming [5 ]
Xu, Tao [4 ]
Yu, Weixia [9 ]
Ytterberg, Jimmy [5 ]
Wong, David T. [9 ,11 ,12 ]
机构
[1] Univ So Calif, Sch Dent, Los Angeles, CA 90089 USA
[2] Univ Rochester, Med Ctr, Ctr Oral Biol, Rochester, NY 14642 USA
[3] Univ Calif San Francisco, Dept Cell & Tissue Biol, San Francisco, CA 94143 USA
[4] Scripps Res Inst, Dept Cell Biol, La Jolla, CA 92037 USA
[5] Univ Calif Los Angeles, Dept Chem & Biochem, Los Angeles, CA 90095 USA
[6] Univ Calif San Francisco, Dept Pharmaceut Chem, San Francisco, CA 94143 USA
[7] Univ Calif Berkeley, Lawrence Berkeley Lab, Berkeley, CA 94720 USA
[8] Univ Calif Los Angeles, David Geffen Sch Med, Los Angeles, CA 90095 USA
[9] Univ Calif Los Angeles, Sch Dent, Los Angeles, CA 90095 USA
[10] Univ Calif Los Angeles, Semel Inst Neurosci & Human Behav, Los Angeles, CA 90095 USA
[11] Univ Calif Los Angeles, Jonsson Comprehens Canc Ctr, Los Angeles, CA 90095 USA
[12] Univ Calif Los Angeles, Div Otolaryngol Head & Neck Surg, Los Angeles, CA 90095 USA
关键词
human saliva; parotid; submandibular; sublingual; ductal secretion; proteomics; mass spectrometry;
D O I
10.1021/pr700764j
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Saliva is a body fluid with important functions in oral and general health. A consortium of three research groups catalogued the proteins in human saliva collected as the ductal secretions: 1166 identifications-914 in parotid and 917 in submandibular/sublingual saliva-were made. The results showed that a high proportion of proteins that are found in plasma and/or tears are also present in saliva along with unique components. The proteins identified are involved in numerous molecular processes ranging from structural functions to enzymatic/catalytic activities. As expected, the majority mapped to the extracellular and secretory compartments. An immunoblot approach was used to validate the presence in saliva of a subset of the proteins identified by mass spectrometric approaches. These experiments focused on novel constituents and proteins for which the peptide evidence was relatively weak. Ultimately, information derived from the work reported here and related published studies can be used to translate blood-based clinical laboratory tests into a format that utilizes saliva. Additionally, a catalogue of the salivary proteome of healthy individuals allows future analyses of salivary samples from individuals with oral and systemic diseases, with the goal of identifying biomarkers with diagnostic and/or prognostic value for these conditions; another possibility is the discovery of therapeutic targets.
引用
收藏
页码:1994 / 2006
页数:13
相关论文
共 103 条
[1]   The human urinary proteome contains more than 1500 proteins, including a large proportion of membrane proteins [J].
Adachi, Jun ;
Kumar, Chanchal ;
Zhang, Yanling ;
Olsen, Jesper V. ;
Mann, Matthias .
GENOME BIOLOGY, 2006, 7 (09)
[2]   Data management and preliminary data analysis in the pilot phase of the HUPO Plasma Proteome Project [J].
Adamski, M ;
Blackwell, T ;
Menon, R ;
Martens, L ;
Hermjakob, H ;
Taylor, C ;
Omenn, GS ;
States, DJ .
PROTEOMICS, 2005, 5 (13) :3246-3261
[3]   Analysis of the human saliva proteome [J].
Amado, FML ;
Vitorino, RMP ;
Domingues, PMDN ;
Lobo, MJC ;
Duarte, JAR .
EXPERT REVIEW OF PROTEOMICS, 2005, 2 (04) :521-539
[4]   The association of basic proline-rich peptides from human parotid gland secretions with caries experience [J].
Ayad, M ;
Van Wuyckhuyse, BC ;
Minaguchi, K ;
Raubertas, RF ;
Bedi, GS ;
Billings, RJ ;
Bowen, WH ;
Tabak, LA .
JOURNAL OF DENTAL RESEARCH, 2000, 79 (04) :976-982
[5]   Salivary mucin as related to oral Streptococcus mutans in elderly people [J].
Baughan, LW ;
Robertello, FJ ;
Sarrett, DC ;
Denny, PA ;
Denny, PC .
ORAL MICROBIOLOGY AND IMMUNOLOGY, 2000, 15 (01) :10-14
[6]   Automatic Quality Assessment of Peptide Tandem Mass Spectra [J].
Bern, Marshall ;
Goldberg, David ;
McDonald, W. Hayes ;
Yates, John R., III .
BIOINFORMATICS, 2004, 20 :49-54
[7]  
BLOCK PL, 1962, NY STATE DENT J, V28, P116
[8]   Reporting protein identification data - The next generation of guidelines [J].
Bradshaw, RA ;
Burlingame, AL ;
Carr, S ;
Aebersold, R .
MOLECULAR & CELLULAR PROTEOMICS, 2006, 5 (05) :787-788
[9]   The need for guidelines in publication of peptide and protein identification data - Working group on publication guidelines for peptide and protein identification data [J].
Carr, S ;
Aebersold, R ;
Baldwin, M ;
Burlingame, A ;
Clauser, K ;
Nesvizhskii, A .
MOLECULAR & CELLULAR PROTEOMICS, 2004, 3 (06) :531-533
[10]   Inhibition of the canonical Wnt signaling pathway by apolipoprotein E4 in PC12 cells [J].
Caruso, Alessandra ;
Motolese, Marta ;
Iacovelli, Luisa ;
Caraci, Filippo ;
Copani, Agata ;
Nicoletti, Ferdinando ;
Terstappen, Georg C. ;
Gaviraghi, Giovanni ;
Caricasole, Andrea .
JOURNAL OF NEUROCHEMISTRY, 2006, 98 (02) :364-371