Oncocers: ceRNA-mediated cross-talk by sponging miRNAs in oncogenic pathways

被引:185
作者
Ergun, Sercan [1 ]
Oztuzcu, Serdar [2 ]
机构
[1] Ordu Univ, Ulubey Vocat Higher Sch, Ordu, Turkey
[2] Gaziantep Univ, Fac Med, Dept Med Biol, Gaziantep, Turkey
关键词
Oncocer; ceRNA; miRNA; lncRNA; Cancer; LONG NONCODING RNAS; COMPETING ENDOGENOUS RNAS; TUMOR-SUPPRESSOR; COMPUTATIONAL ANALYSIS; ENDOMETRIAL CANCER; MESSENGER-RNAS; STEM-CELLS; EXPRESSION; MICRORNAS; TARGET;
D O I
10.1007/s13277-015-3346-x
中图分类号
R73 [肿瘤学];
学科分类号
100214 [肿瘤学];
摘要
Competing endogenous RNAs (ceRNAs) are RNA transcripts which can communicate with each other by decreasing targeting concentration of micro-RNA (miRNA) with the derepression of other messenger RNAs (mRNAs) having the common miRNA response elements (MREs). Oncocers are ceRNAs taking crucial roles in oncogenic pathways processed in many types of cancer, and this study analyzes oncocer-mediated cross-talk by sponging microRNAs (miRNAs) in these pathways. While doing this, breast, liver, colon, prostate, gastric, lung, endometrium, thyroid and epithelial cancers and melanoma, rhabdomyosarcoma, glioblastoma, acute promyelocytic leukemia, retinoblastoma, and neuroblastoma were analyzed with respect to ceRNA-based carcinogenesis. This study defines, firstly, oncocers in the literature and contains all oncocer-related findings found up to now. Therefore, it will help to increase our comprehension about oncocer-mediated mechanisms. Via this study, a novel perspective would be produced to make clear cancer mechanisms and suggest novel approaches to regulate ceRNA networks via miRNA competition for cancer therapeutics.
引用
收藏
页码:3129 / 3136
页数:8
相关论文
共 56 条
[1]
Integrated transcriptional and competitive endogenous RNA networks are cross-regulated in permissive molecular environments [J].
Ala, Ugo ;
Karreth, Florian A. ;
Bosia, Carla ;
Pagnani, Andrea ;
Taulli, Riccardo ;
Leopold, Valentine ;
Tay, Yvonne ;
Provero, Paolo ;
Zecchina, Riccardo ;
Pandolfi, Pier Paolo .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2013, 110 (18) :7154-7159
[2]
Arman K, 2014, MOL BIOL REP, V41, P1
[3]
MicroRNAs: Target Recognition and Regulatory Functions [J].
Bartel, David P. .
CELL, 2009, 136 (02) :215-233
[4]
Integrative analysis of the melanoma transcriptome [J].
Berger, Michael F. ;
Levin, Joshua Z. ;
Vijayendran, Krishna ;
Sivachenko, Andrey ;
Adiconis, Xian ;
Maguire, Jared ;
Johnson, Laura A. ;
Robinson, James ;
Verhaak, Roel G. ;
Sougnez, Carrie ;
Onofrio, Robert C. ;
Ziaugra, Liuda ;
Cibulskis, Kristian ;
Laine, Elisabeth ;
Barretina, Jordi ;
Winckler, Wendy ;
Fisher, David E. ;
Getz, Gad ;
Meyerson, Matthew ;
Jaffe, David B. ;
Gabriel, Stacey B. ;
Lander, Eric S. ;
Dummer, Reinhard ;
Gnirke, Andreas ;
Nusbaum, Chad ;
Garraway, Levi A. .
GENOME RESEARCH, 2010, 20 (04) :413-427
[5]
Deciphering the rules of ceRNA networks [J].
Cesana, Marcella ;
Daley, George Q. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2013, 110 (18) :7112-7113
[6]
A Long Noncoding RNA Controls Muscle Differentiation by Functioning as a Competing Endogenous RNA [J].
Cesana, Marcella ;
Cacchiarelli, Davide ;
Legnini, Ivano ;
Santini, Tiziana ;
Sthandier, Olga ;
Chinappi, Mauro ;
Tramontano, Anna ;
Bozzoni, Irene .
CELL, 2011, 147 (02) :358-369
[7]
miRNA-34 intrinsically links p53 tumor suppressor and Wnt signaling [J].
Cha, Yong Hoon ;
Kim, Nam Hee ;
Park, Changbum ;
Lee, Inhan ;
Kim, Hyun Sil ;
Yook, Jong In .
CELL CYCLE, 2012, 11 (07) :1273-1281
[8]
Costa Valerio, 2012, Frontiers in Genetics, V3, P231, DOI 10.3389/fgene.2012.00231
[9]
Emerging Roles of Competing Endogenous RNAs in Cancer: Insights from the Regulation of PTEN [J].
de Giorgio, Alexander ;
Krell, Jonathan ;
Harding, Victoria ;
Stebbing, Justin ;
Castellano, Leandro .
MOLECULAR AND CELLULAR BIOLOGY, 2013, 33 (20) :3976-3982
[10]
Long non-coding RNAs in stem cells and cancer [J].
Eades, Gabriel ;
Zhang, Yong-Shu ;
Li, Qing-Lin ;
Xia, Ji-Xiang ;
Yao, Yuan ;
Zhou, Qun .
WORLD JOURNAL OF CLINICAL ONCOLOGY, 2014, 5 (02) :134-141