Comparative Evaluation of Three Commercial Quantitative Cytomegalovirus Standards by Use of Digital and Real-Time PCR

被引:32
作者
Hayden, R. T. [1 ]
Gu, Z. [1 ]
Sam, S. S. [3 ]
Sun, Y. [2 ]
Tang, L. [2 ]
Pounds, S. [2 ]
Caliendo, A. M. [4 ]
机构
[1] St Jude Childrens Res Hosp, Dept Pathol, Memphis, TN 38105 USA
[2] St Jude Childrens Res Hosp, Dept Biostat, Memphis, TN 38105 USA
[3] Miriam Hosp, Providence, RI 02906 USA
[4] Brown Univ, Dept Med, Alpert Med Sch, Providence, RI 02912 USA
关键词
VIRAL LOAD; ASSAYS; VIRUS; DNA; COMMUTABILITY; VARIABILITY; DIAGNOSTICS; DISEASE;
D O I
10.1128/JCM.03375-14
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
The recent development of the 1st WHO International Standard for human cytomegalovirus (CMV) and the introduction of commercially produced secondary standards have raised hopes of improved agreement among laboratories performing quantitative PCR for CMV. However, data to evaluate the trueness and uniformity of secondary standards and the consistency of results achieved when these materials are run on various assays are lacking. Three concentrations of each of the three commercially prepared secondary CMV standards were tested in quadruplicate by three real-time and two digital PCR methods. The mean results were compared in a pairwise fashion with nominal values provided by each manufacturer. The agreement of results among all methods for each sample and for like concentrations of each standard was also assessed. The relationship between the nominal values of standards and the measured values varied, depending upon the assay used and the manufacturer of the standards, with the degree of bias ranging from +0.6 to -1.0 log(10) IU/ml. The mean digital PCR result differed significantly among the secondary standards, as did the results of the real-time PCRs, particularly when plotted against nominal log(10) IU values. Commercially available quantitative secondary CMV standards produce variable results when tested by different real-time and digital PCR assays, with various magnitudes of bias compared to nominal values. These findings suggest that the use of such materials may not achieve the intended uniformity among laboratories measuring CMV viral load, as envisioned by adaptation of the WHO standard.
引用
收藏
页码:1500 / 1505
页数:6
相关论文
共 22 条
  • [1] A Commutable Cytomegalovirus Calibrator Is Required to Improve the Agreement of Viral Load Values between Laboratories
    Caliendo, Angela M.
    Shahbazian, Mona D.
    Schaper, Carl
    Ingersoll, Jessica
    Abdul-Ali, Deborah
    Boonyaratanakornkit, Jerry
    Pang, Xiao-Li
    Fox, Julie
    Preiksaitis, Jutta
    Schoenbrunner, E. Ralf
    [J]. CLINICAL CHEMISTRY, 2009, 55 (09) : 1701 - 1710
  • [2] Commutability: a peculiar property of calibration and control materials. Definition and evaluation
    Cattozzo, Giampaolo
    Franzini, Carlo
    [J]. CLINICAL CHEMISTRY AND LABORATORY MEDICINE, 2013, 51 (08) : E167 - E168
  • [3] Epstein-Barr viral load measurement as a marker of EBV-related disease
    Fan, HX
    Gulley, ML
    [J]. MOLECULAR DIAGNOSIS, 2001, 6 (04): : 279 - 289
  • [4] Fryer JF., 2010, Collaborative study to evaluate the proposed 1st [first] WHO international standard for human cytomegalovirus (HCMV) for nucleic acid amplification (NAT)- based assays
  • [5] EBV viral load detection in clinical virology
    Gaertner, Barbara
    Preiksaitis, Jutta K.
    [J]. JOURNAL OF CLINICAL VIROLOGY, 2010, 48 (02) : 82 - 90
  • [6] Correlation of viral load as determined by real-time RT-PCR and clinical characteristics of respiratory syncytial virus lower respiratory tract infections in early infancy
    Gerna, G.
    Campanini, G.
    Rognoni, V.
    Marchi, A.
    Rovida, F.
    Piralla, A.
    Percivalle, E.
    [J]. JOURNAL OF CLINICAL VIROLOGY, 2008, 41 (01) : 49 - 52
  • [7] Hayden RT, 2008, J CLIN MICROBIOL, V46, P157, DOI 10.1128/JCM.01252-07
  • [8] Multicenter Evaluation of a Commercial Cytomegalovirus Quantitative Standard: Effects of Commutability on Interlaboratory Concordance
    Hayden, R. T.
    Shahbazian, M. D.
    Valsamakis, A.
    Boonyaratanakornkit, J.
    Cook, L.
    Pang, X. L.
    Preiksaitis, J. K.
    Schoenbrunner, E. R.
    Caliendo, A. M.
    [J]. JOURNAL OF CLINICAL MICROBIOLOGY, 2013, 51 (11) : 3811 - 3817
  • [9] Factors Contributing to Variability of Quantitative Viral PCR Results in Proficiency Testing Samples: a Multivariate Analysis
    Hayden, R. T.
    Yan, X.
    Wick, M. T.
    Rodriguez, A. B.
    Xiong, X.
    Ginocchio, C. C.
    Mitchell, M. J.
    Caliendo, A. M.
    [J]. JOURNAL OF CLINICAL MICROBIOLOGY, 2012, 50 (02) : 337 - 345
  • [10] Standard Reference Material 2366 for Measurement of Human Cytomegalovirus DNA
    Haynes, Ross J.
    Kline, Margaret C.
    Toman, Blaza
    Scott, Calum
    Wallace, Paul
    Butler, John M.
    Holden, Marcia J.
    [J]. JOURNAL OF MOLECULAR DIAGNOSTICS, 2013, 15 (02) : 177 - 185