DNA-based methods for monitoring invasive species: a review and prospectus

被引:194
作者
Darling, John A. [1 ]
Blum, Michael J. [1 ]
机构
[1] US EPA, Natl Exposure Res Lab, Mol ecol Res Branch, Cincinnati, OH 45268 USA
关键词
detection; DNA barcode; DNA-based identification; DNA taxonomy; invasive species; microarray; monitoring; PCR;
D O I
10.1007/s10530-006-9079-4
中图分类号
X176 [生物多样性保护];
学科分类号
090705 ;
摘要
The recent explosion of interest in DNA-based tools for species identification has prompted widespread speculation on the future availability of inexpensive, rapid, and accurate means of identifying specimens and assessing biodiversity. One applied field that may benefit dramatically from the development of such technologies is the detection, identification, and monitoring of invasive species. Recent studies have demonstrated the feasibility of DNA-based tools for such important tasks as confirmation of specimen identity and targeted screening for known or anticipated invaders. However, significant technological hurdles must be overcome before more ambitious applications, including estimation of propagule pressure and comprehensive surveys of complex environmental samples, are to be realized. Here we review existing methods, examine the technical difficulties associated with development of more sophisticated tools, and consider the potential utility of these DNA-based technologies for various applications relevant to invasive species monitoring.
引用
收藏
页码:751 / 765
页数:15
相关论文
共 88 条
[1]   Diversity and ecology of soil fungal communities: increased understanding through the application of molecular techniques [J].
Anderson, IC ;
Cairney, JWG .
ENVIRONMENTAL MICROBIOLOGY, 2004, 6 (08) :769-779
[2]   Detection of DNA oligonucleotides on nanowire array electrodes using chronocoulometry [J].
Andreu, A ;
Merkert, JW ;
Lecaros, LA ;
Broglin, BL ;
Brazell, JT ;
El-Kouedi, M .
SENSORS AND ACTUATORS B-CHEMICAL, 2006, 114 (02) :1116-1120
[3]   DNA barcodes for biosecurity: invasive species identification [J].
Armstrong, KF ;
Ball, SL .
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 2005, 360 (1462) :1813-1823
[4]   Fruit fly (Diptera: Tephritidae) species identification: A rapid molecular diagnostic technique for quarantine application [J].
Armstrong, KF ;
Cameron, CM ;
Frampton, ER .
BULLETIN OF ENTOMOLOGICAL RESEARCH, 1997, 87 (02) :111-118
[5]   Identifying spiders through DNA barcodes [J].
Barrett, RDH ;
Hebert, PDN .
CANADIAN JOURNAL OF ZOOLOGY, 2005, 83 (03) :481-491
[6]   DNA barcoding of parasites and invertebrate disease vectors: what you don't know can hurt you [J].
Besansky, NJ ;
Severson, DW ;
Ferdig, MT .
TRENDS IN PARASITOLOGY, 2003, 19 (12) :545-546
[7]   The promise of a DNA taxonomy [J].
Blaxter, ML .
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 2004, 359 (1444) :669-679
[8]   New approaches to analyzing microbial biodiversity data [J].
Bohannan, BJM ;
Hughes, J .
CURRENT OPINION IN MICROBIOLOGY, 2003, 6 (03) :282-287
[9]   Integrating DNA data and traditional taxonomy to streamline biodiversity assessment:: an example from edaphic beetles in the Klamath ecoregion, California, USA [J].
Caesar, Ryan M. ;
Sorensson, Mikael ;
Cognato, Anthony I. .
DIVERSITY AND DISTRIBUTIONS, 2006, 12 (05) :483-489
[10]   Nanotechnologies for biomolecular detection and medical diagnostics [J].
Cheng, MMC ;
Cuda, G ;
Bunimovich, YL ;
Gaspari, M ;
Heath, JR ;
Hill, HD ;
Mirkin, CA ;
Nijdam, AJ ;
Terracciano, R ;
Thundat, T ;
Ferrari, M .
CURRENT OPINION IN CHEMICAL BIOLOGY, 2006, 10 (01) :11-19