The role of water structure in conformational changes of nucleic acids in ambient and high-pressure conditions

被引:75
作者
Barciszewski, J
Jurczak, J
Porowski, S
Specht, T
Erdmann, VA
机构
[1] Polish Acad Sci, Inst Bioorgan Chem, PL-61704 Poznan, Poland
[2] Polish Acad Sci, Inst Organ Chem, Warsaw, Poland
[3] Warsaw Univ, Dept Chem, Warsaw, Poland
[4] Polish Acad Sci, Ctr Excellence, High Pressure Res Ctr, Warsaw, Poland
[5] Free Univ Berlin, Inst Biochem, D-1000 Berlin, Germany
来源
EUROPEAN JOURNAL OF BIOCHEMISTRY | 1999年 / 260卷 / 02期
关键词
structure of water; high pressure; conformational changes; nucleic acids;
D O I
10.1046/j.1432-1327.1999.00184.x
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
This review describes and summarizes data on the structure and properties of water under normal conditions, at high salt concentration and under high pressure. We correlate the observed conformational changes in nucleic acids with changes in water structure and activity, and suggest a mechanism of conformational transitions of nucleic acids which accounts for changes in the water structure. From the biophysical, biochemical and crystallographic data we conclude that the Z-DNA form can be induced only at low water activity produced by high salt concentrations or high pressure, and accompanied by the stabilizing conjugative effect of the cytidine O4' electrons of the CG base pairs.
引用
收藏
页码:293 / 307
页数:15
相关论文
共 117 条
[101]   Role of base-backbone and base-base interactions in alternating DNA conformations [J].
Suzuki, M ;
Yagi, N ;
Finch, JT .
FEBS LETTERS, 1996, 379 (02) :148-152
[102]   BENZENE FORMS HYDROGEN-BONDS WITH WATER [J].
SUZUKI, S ;
GREEN, PG ;
BUMGARNER, RE ;
DASGUPTA, S ;
GODDARD, WA ;
BLAKE, GA .
SCIENCE, 1992, 257 (5072) :942-944
[103]  
TAUSCHNER B, 1995, Z LEBENSM UNTERS FOR, V200, P1
[104]   WATER-STRUCTURE OF A HYDROPHOBIC PROTEIN AT ATOMIC RESOLUTION - PENTAGON RINGS OF WATER-MOLECULES IN CRYSTALS OF CRAMBIN [J].
TEETER, MM .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA-BIOLOGICAL SCIENCES, 1984, 81 (19) :6014-6018
[105]   WATER-STRUCTURE IN CONCENTRATED LITHIUM-CHLORIDE SOLUTIONS [J].
TROMP, RH ;
NEILSON, GW ;
SOPER, AK .
JOURNAL OF CHEMICAL PHYSICS, 1992, 96 (11) :8460-8469
[106]   EFFECT OF HIGH-PRESSURE ON A TRANSITION-METAL-CATALYZED CYCLOADDITION [J].
TROST, BM ;
PARQUETTE, JR ;
MARQUART, AL .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1995, 117 (11) :3284-3285
[107]   SEX CONVERSION INDUCED BY HYDROSTATIC PRESSURE IN MARINE COPEPOD TIGRIOPUS CALIFORNICUS [J].
VACQUIER, VD ;
BELSER, WL .
SCIENCE, 1965, 150 (3703) :1619-&
[108]   SEQUENCE DEPENDENT HYDRATION OF DNA [J].
VOVELLE, F ;
GOODFELLOW, JM .
INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES, 1990, 12 (06) :369-373
[109]   Structure, dynamics, and thermodynamics of clusters: Tales from topographic potential surfaces [J].
Wales, DJ .
SCIENCE, 1996, 271 (5251) :925-929
[110]   MOLECULAR-STRUCTURE OF A LEFT-HANDED DOUBLE HELICAL DNA FRAGMENT AT ATOMIC RESOLUTION [J].
WANG, AHJ ;
QUIGLEY, GJ ;
KOLPAK, FJ ;
CRAWFORD, JL ;
VANBOOM, JH ;
VANDERMAREL, G ;
RICH, A .
NATURE, 1979, 282 (5740) :680-686