Transferability of coarse-grained force fields:: The polymer case

被引:190
作者
Carbone, Paola [1 ]
Varzaneh, Hossein Ali Karimi [1 ]
Chen, Xiaoyu [1 ]
Mueller-Plathe, Florian [1 ]
机构
[1] Tech Univ Darmstadt, Eduard Zintl Inst Anorgan & Phys Chem, D-64287 Darmstadt, Germany
关键词
STEADY SHEAR-FLOW; MOLECULAR-DYNAMICS; ATOMISTIC SIMULATIONS; ATACTIC POLYSTYRENE; CHAINS; MODEL; MELTS; ENTANGLEMENTS; POTENTIALS;
D O I
10.1063/1.2829409
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
A key question for all coarse-graining methodologies is the degree of transferability of the resulting force field between various systems and thermodynamic conditions. Here we present a detailed study of the transferability over different thermodynamic states of a coarse-grained (CG) force field developed using the iterative Boltzmann inversion method. The force field is optimized against distribution functions obtained from atomistic simulations. We analyze the polymer case by investigating the bulk of polystyrene and polyamide-6,6 whose coarse-grained models differ in the chain length and in the number of atoms lumped in one bead. The effect of temperature and pressure on static, dynamic, and thermodynamic properties is tested by comparing systematically the coarse-grain results with the atomistic ones. We find that the CG model describing the polystyrene is transferable only in a narrow range of temperature and it fails in describing the change of the bulk density when temperature is 80 K lower than the optimization one. Moreover the calculation of the self-diffusion coefficient shows that the CG model is characterized by a faster dynamics than the atomistic one and that it overestimates the isothermal compressibility. On the contrary, the polyamide-6,6 CG model turns out to be fully transferable between different thermodynamic conditions. The transferability is checked by changing either the temperature or the pressure of the simulation. We find that, in this case, the CG model is able to follow all the intra- and interstructural rearrangements caused by the temperature changes. In addition, while at low temperature the difference between the CG and atomistic dynamics is remarkable due to the presence of hydrogen bonds in the atomistic systems, for high temperatures, the speedup of the CG dynamics is strongly reduced, leading to a CG diffusion coefficient only six times bigger than the atomistic one. Moreover, the isothermal compressibility calculated at different temperatures agrees very well with the experimental one. We find that the polymer chain length does not affect the transferability of the force field and we attribute such transferability mainly to the finer model used in describing the polyamide-6,6 than the polystyrene. (C) 2008 American Institute of Physics.
引用
收藏
页数:11
相关论文
共 30 条
[21]   Coarse-grained molecular dynamics simulations of polymer melts in transient and steady shear flow [J].
Padding, JT ;
Briels, WJ .
JOURNAL OF CHEMICAL PHYSICS, 2003, 118 (22) :10276-10286
[22]   Preparing relaxed systems of amorphous polymers by multiscale simulation:: Application to cellulose [J].
Queyroy, S ;
Neyertz, S ;
Brown, D ;
Müller-Plathe, F .
MACROMOLECULES, 2004, 37 (19) :7338-7350
[23]   Deriving effective mesoscale potentials from atomistic simulations [J].
Reith, D ;
Pütz, M ;
Müller-Plathe, F .
JOURNAL OF COMPUTATIONAL CHEMISTRY, 2003, 24 (13) :1624-1636
[24]   Aggregation and vesiculation of membrane proteins by curvature-mediated interactions [J].
Reynwar, Benedict J. ;
Illya, Gregoria ;
Harmandaris, Vagelis A. ;
Mueller, Martin M. ;
Kremer, Kurt ;
Deserno, Markus .
NATURE, 2007, 447 (7143) :461-464
[25]   Coarse-grained and reverse-mapped united-atom simulations of long-chain atactic polystyrene melts:: Structure, thermodynamic properties, chain conformation, and entanglements [J].
Spyriouni, Theodora ;
Tzoumanekas, Christos ;
Theodorou, Doros ;
Mueller-Plathe, Florian ;
Milano, Giuseppe .
MACROMOLECULES, 2007, 40 (10) :3876-3885
[26]   Hyperbranched conjugated polyelectrolyte bilayers for solar-cell applications [J].
Taranekar, Prasad ;
Qiao, Qiquan ;
Jiang, Hui ;
Ghiviriga, Ion ;
Schanze, Kirk S. ;
Reynolds, John R. .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2007, 129 (29) :8958-+
[27]  
VARZANEH HAK, IN PRESS COARSE GRAI
[28]   Coarse graining of short polythylene chains for studying polymer crystallization [J].
Vettorel, Thomas ;
Meyer, Hendrik .
JOURNAL OF CHEMICAL THEORY AND COMPUTATION, 2006, 2 (03) :616-629
[29]  
Viers B. D, 1999, POLYM DATA HDB
[30]   A CORRELATION BETWEEN CRITICAL END-TO-END DISTANCE FOR ENTANGLEMENTS AND MOLECULAR CHAIN DIAMETER OF POLYMERS [J].
ZANG, YH ;
CARREAU, PJ .
JOURNAL OF APPLIED POLYMER SCIENCE, 1991, 42 (07) :1965-1968