A genomic region encompassing a cluster of olfactory receptor genes and a myosin light chain kinase (MYLK) gene is duplicated on human chromosome regions 3q13-q21 and 3p13

被引:51
作者
Brand-Arpon, V
Rouquier, S
Massa, H
de Jong, PJ
Ferraz, C
Ioannou, PA
Demaille, JG
Trask, BJ
Giorgi, D
机构
[1] CNRS, IGH, UPR 1142, F-34396 Montpellier 5, France
[2] Univ Washington, Dept Mol Biotechnol, Seattle, WA 98195 USA
[3] Roswell Pk Canc Inst, Dept Canc Genet, Buffalo, NY 14263 USA
[4] Cyprus Inst Neurol & Genet, Nicosia, Cyprus
关键词
D O I
10.1006/geno.1998.5690
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
The olfactory receptor (OR) multigene family is widely distributed in the human genome. We characterize here a new cluster of four OR genes (HGMW-approved symbols OR7E20P, OR7E6P, OR7E21P, and OR7E22P) on human chromosome 3p13 that is contained in an similar to 250-kb region. This region has been physically mapped, and a 106-kb portion containing the OR genes has been sequenced. All the OR sequences are disrupted by frameshifts and stop codons and appear to have arisen through local duplications. A myosin light chain kinase pseudogene (HGMW-approved symbol MYLKP) lies at one end of the OR gene cluster. Sequences spanning the entire region are also present at 3q13-q21, the site of the functional MYLK gene. This region duplicated locally before the divergence of primates, and the two paralogous copies were later separated to sites on either side of the centromere. This study increases our understanding of the evolution of the human genome. The 3p13 cluster is the first example of a tandem array of OR pseudogenes, and duplications of such clusters may account for the accumulation of a large number of pseudogenes in the human genome. (C) 1999 Academic Press.
引用
收藏
页码:98 / 110
页数:13
相关论文
共 46 条
[21]   EVOLUTION OF THE VERTEBRATE GENOME AS REFLECTED IN PARALOGOUS CHROMOSOMAL REGIONS IN MAN AND THE HOUSE MOUSE [J].
LUNDIN, LG .
GENOMICS, 1993, 16 (01) :1-19
[22]   Human endogenous retroviral element k10 (HERV-K10): Chromosomal localization by somatic hybrid mapping and fluorescence in situ hybridization [J].
Meese, E ;
Gottert, E ;
Zang, KD ;
Sauter, M ;
Schommer, S ;
MuellerLantzsch, N .
CYTOGENETICS AND CELL GENETICS, 1996, 72 (01) :40-42
[23]   Developmental biology - Hox gene variation and evolution [J].
Meyer, A .
NATURE, 1998, 391 (6664) :225-+
[24]  
NADEAU J H, 1991, P269
[25]  
Nadeau JH, 1997, GENETICS, V147, P1259
[26]  
OHNO S, 1968, HEREDITAS-GENETISK A, V59, P169
[27]   GAIN OF FUNCTION MUTATIONS FOR PARALOGOUS HOX GENES - IMPLICATIONS FOR THE EVOLUTION OF HOX GENE-FUNCTION [J].
POLLOCK, RA ;
SREENATH, T ;
NGO, L ;
BIEBERICH, CJ .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1995, 92 (10) :4492-4496
[28]   Two sequence-ready contigs spanning the two copies of a 200-kb duplication on human 21q: Partial sequence and polymorphisms [J].
Potier, MC ;
Dutriaux, A ;
Orti, R ;
Groet, J ;
Gibelin, N ;
Karadima, G ;
Lutfalla, G ;
Lynn, A ;
Van Broeckhoven, C ;
Chakravarti, A ;
Petersen, M ;
Nizetic, D ;
Delabar, J ;
Rossier, J .
GENOMICS, 1998, 51 (03) :417-426
[29]   THE HUMAN MYOSIN LIGHT-CHAIN KINASE (MLCK) FROM HIPPOCAMPUS - CLONING, SEQUENCING, EXPRESSION, AND LOCALIZATION TO 3QCEN-Q21 [J].
POTIER, MC ;
CHELOT, E ;
PEKARSKY, Y ;
GARDINER, K ;
ROSSIER, J ;
TURNELL, WG .
GENOMICS, 1995, 29 (03) :562-570
[30]  
Prince VE, 1998, DEVELOPMENT, V125, P407