Information Transduction Capacity of Noisy Biochemical Signaling Networks

被引:372
作者
Cheong, Raymond [1 ]
Rhee, Alex [1 ]
Wang, Chiaochun Joanne [1 ]
Nemenman, Ilya [2 ,3 ]
Levchenko, Andre [1 ]
机构
[1] Johns Hopkins Univ, Dept Biomed Engn, Baltimore, MD 21218 USA
[2] Emory Univ, Dept Phys, Atlanta, GA 30322 USA
[3] Emory Univ, Dept Biol, Atlanta, GA 30322 USA
关键词
NF-KAPPA-B; STOCHASTIC GENE-EXPRESSION; SINGLE-CELL; TEMPORAL CONTROL; DYNAMICS; POPULATION; OSCILLATIONS; VARIABILITY; ACTIVATION; ALPHA;
D O I
10.1126/science.1204553
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Molecular noise restricts the ability of an individual cell to resolve input signals of different strengths and gather information about the external environment. Transmitting information through complex signaling networks with redundancies can overcome this limitation. We developed an integrative theoretical and experimental framework, based on the formalism of information theory, to quantitatively predict and measure the amount of information transduced by molecular and cellular networks. Analyzing tumor necrosis factor (TNF) signaling revealed that individual TNF signaling pathways transduce information sufficient for accurate binary decisions, and an upstream bottleneck limits the information gained via multiple integrated pathways. Negative feedback to this bottleneck could both alleviate and enhance its limiting effect, despite decreasing noise. Bottlenecks likewise constrain information attained by networks signaling through multiple genes or cells.
引用
收藏
页码:354 / 358
页数:5
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