FSL

被引:7943
作者
Jenkinson, Mark [1 ]
Beckmann, Christian F. [1 ]
Behrens, Timothy Ej. [1 ]
Woolrich, Mark W. [1 ]
Smith, Stephen M. [1 ]
机构
[1] Univ Oxford, FMRIB Ctr, Nuffield Dept Clin Neurosci, Oxford OX1 2JD, England
基金
英国工程与自然科学研究理事会; 英国医学研究理事会;
关键词
FSL; Software; ADOLESCENT-ONSET SCHIZOPHRENIA; ECHO-PLANAR IMAGES; ABNORMALITIES; INFERENCE;
D O I
10.1016/j.neuroimage.2011.09.015
中图分类号
Q189 [神经科学];
学科分类号
071006 ;
摘要
FSL (the FMRIB Software Library) is a comprehensive library of analysis tools for functional, structural and diffusion MRI brain imaging data, written mainly by members of the Analysis Group, FMRIB, Oxford. For this Neuroimage special issue on "20 years of fMRI" we have been asked to write about the history, developments and current status of FSL We also include some descriptions of parts of FSL that are not well covered in the existing literature. We hope that some of this content might be of interest to users of FSL, and also maybe to new research groups considering creating, releasing and supporting new software packages for brain image analysis. (C) 2011 Elsevier Inc. All rights reserved.
引用
收藏
页码:782 / 790
页数:9
相关论文
共 18 条
[1]   Voxel-based morphometry - The methods [J].
Ashburner, J ;
Friston, KJ .
NEUROIMAGE, 2000, 11 (06) :805-821
[2]   CONTROLLING THE FALSE DISCOVERY RATE - A PRACTICAL AND POWERFUL APPROACH TO MULTIPLE TESTING [J].
BENJAMINI, Y ;
HOCHBERG, Y .
JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES B-STATISTICAL METHODOLOGY, 1995, 57 (01) :289-300
[3]   An evaluation of the use of magnetic field maps to undistort echo-planar images [J].
Cusack, R ;
Brett, M ;
Osswald, K .
NEUROIMAGE, 2003, 18 (01) :127-142
[4]   Anatomically related grey and white matter abnormalities in adolescent-onset schizophrenia [J].
Douaud, Gwenaelle ;
Smith, Stephen ;
Jenkinson, Mark ;
Behrens, Timothy ;
Johansen-Berg, Heidi ;
Vickers, John ;
James, Susan ;
Voets, Natalie ;
Watkins, Kate ;
Matthews, Paul M. ;
James, Anthony .
BRAIN, 2007, 130 :2375-2386
[5]  
Friston KJ., 1994, HUMAN BRAIN MAPPING, V1, P210, DOI [DOI 10.1002/HBM.460010306, 10.1002/hbm.460010306]
[6]   A voxel-based morphometric study of ageing in 465 normal adult human brains [J].
Good, CD ;
Johnsrude, IS ;
Ashburner, J ;
Henson, RNA ;
Friston, KJ ;
Frackowiak, RSJ .
NEUROIMAGE, 2001, 14 (01) :21-36
[7]   Linked independent component analysis for multimodal data fusion [J].
Groves, Adrian R. ;
Beckmann, Christian F. ;
Smith, Steve M. ;
Woolrich, Mark W. .
NEUROIMAGE, 2011, 54 (03) :2198-2217
[8]   CORRECTION FOR GEOMETRIC DISTORTION IN ECHO-PLANAR IMAGES FROM B-0 FIELD VARIATIONS [J].
JEZZARD, P ;
BALABAN, RS .
MAGNETIC RESONANCE IN MEDICINE, 1995, 34 (01) :65-73
[9]   Nonparametric permutation tests for functional neuroimaging: A primer with examples [J].
Nichols, TE ;
Holmes, AP .
HUMAN BRAIN MAPPING, 2002, 15 (01) :1-25
[10]   Nonrigid registration using free-form deformations: Application to breast MR images [J].
Rueckert, D ;
Sonoda, LI ;
Hayes, C ;
Hill, DLG ;
Leach, MO ;
Hawkes, DJ .
IEEE TRANSACTIONS ON MEDICAL IMAGING, 1999, 18 (08) :712-721