Identification of sequence variation in the galactose-1-phosphate uridyl transferase gene by dHPLC

被引:5
作者
Flanagan, JM
Tighe, O
O'Neill, C
Naughten, E
Mayne, PD
Croke, DT [1 ]
机构
[1] Royal Coll Surgeons Ireland, Dept Biochem, Dublin 2, Ireland
[2] Childrens Univ Hosp, Metab Unit, Dublin 1, Ireland
[3] Childrens Univ Hosp, Dept Pathol, Dublin 1, Ireland
关键词
galactosaemia; galactose-1-phosphate uridyl transferase; single nucleotide polymorphism; denaturing high performance liquid chromatography; polymorphism;
D O I
10.1016/j.ymgme.2003.10.008
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
Transferase-deficient galactosaemia is an inherited disorder of carbohydrate metabolism, caused by mutation at the galactose-1-phosphate uridyl transferase (GALT) locus. A denaturing high performance liquid chromatography (dHPLC) method was developed for variant scanning of the GALT gene. The method unequivocally identified the Duarte D1, D2, Q188R, and K285N GALT alleles and associated polymorphisms. Length polymorphism in an intronic Alu repeat was characterised and a novel Single Nucleotide Polymorphism (IVS10nt-322g-->t) associated with the D1 allele was identified. (C) 2003 Published by Elsevier Inc.
引用
收藏
页码:133 / 136
页数:4
相关论文
共 17 条
[11]   Rapid, simple alkaline extraction of human genomic DNA from whole blood, buccal epithelial cells, semen and forensic stains for PCR [J].
Rudbeck, L ;
Dissing, J .
BIOTECHNIQUES, 1998, 25 (04) :588-+
[12]   A COMPUTER-PROGRAM FOR CHOOSING OPTIMAL OLIGONUCLEOTIDES FOR FILTER HYBRIDIZATION, SEQUENCING AND INVITRO AMPLIFICATION OF DNA [J].
RYCHLIK, W ;
RHOADS, RE .
NUCLEIC ACIDS RESEARCH, 1989, 17 (21) :8543-8551
[13]  
Segal S., 1995, METABOLIC MOL BASIS, P967
[14]   Duarte-1 (Los Angeles) and Duarte-2 (Duarte) variants in Germany:: Two new mutations in the GALT gene which cause a GALT activity decrease by 40-50% of normal in red cells [J].
Shin, YS ;
Koch, HG ;
Köhler, M ;
Hoffmann, G ;
Patsoura, A ;
Podskarbi, T .
JOURNAL OF INHERITED METABOLIC DISEASE, 1998, 21 (03) :232-235
[15]  
Tyfield L, 1999, HUM MUTAT, V13, P417, DOI 10.1002/(SICI)1098-1004(1999)13:6<417::AID-HUMU1>3.0.CO
[16]  
2-0
[17]   Denaturing high-performance liquid chromatography: A review [J].
Xiao, WZ ;
Oefner, PJ .
HUMAN MUTATION, 2001, 17 (06) :439-474