MukB acts as a macromolecular clamp in DNA condensation

被引:72
作者
Cui, Yuanbo [1 ]
Petrushenko, Zoya M. [1 ]
Rybenkov, Valentin V. [1 ]
机构
[1] Univ Oklahoma, Dept Chem & Biochem, Norman, OK 73019 USA
关键词
D O I
10.1038/nsmb.1410
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Correct folding of the chromosome into its highly ordered structure requires the action of condensins. The multisubunit condensins are highly conserved from bacteria to humans, and at their core they contain the characteristic V-shaped dimer of structural maintenance of chromosome proteins. The mechanism of DNA rearrangements by condensins remains unclear. Using magnetic tweezers, we show that bacterial condensin MukB acts as an ATP-modulated macromolecular assemblage in DNA condensation. Condensation occurs in a highly cooperative manner, resulting in the formation of force-resilient clusters. ATP regulates nucleation but not propagation of the clusters and seems to play a structural role. MukB clusters can further interact with each other, thereby bringing distant DNA segments together. The resulting activity has not previously been described among DNA-remodeling machines and may explain how the protein can organize the global structure of the chromosome.
引用
收藏
页码:411 / 418
页数:8
相关论文
共 60 条
[31]   A two-step scaffolding model for mitotic chromosome assembly [J].
Maeshima, K ;
Laemmli, UK .
DEVELOPMENTAL CELL, 2003, 4 (04) :467-480
[32]   Comparison of MukB homodimer versus MukBEF complex molecular architectures by electron microscopy reveals a higher-order multimerization [J].
Matoba, K ;
Yamazoe, M ;
Mayanagi, K ;
Morikawa, K ;
Hiraga, S .
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2005, 333 (03) :694-702
[33]   The symmetrical structure of structural maintenance of chromosomes (SMC) and MukB proteins: Long, antiparallel coiled coils, folded at a flexible hinge [J].
Melby, TE ;
Ciampaglio, CN ;
Briscoe, G ;
Erickson, HP .
JOURNAL OF CELL BIOLOGY, 1998, 142 (06) :1595-1604
[34]   ON NATURE OF ALLOSTERIC TRANSITIONS - A PLAUSIBLE MODEL [J].
MONOD, J ;
WYMAN, J ;
CHANGEUX, JP .
JOURNAL OF MOLECULAR BIOLOGY, 1965, 12 (01) :88-&
[35]   The structure and function of SMC and Kleisin complexes [J].
Nasmyth, K ;
Haering, CH .
ANNUAL REVIEW OF BIOCHEMISTRY, 2005, 74 :595-648
[36]  
Niki H, 2000, GENE DEV, V14, P212
[37]   ESCHERICHIA-COLI MUKB PROTEIN INVOLVED IN CHROMOSOME PARTITION FORMS A HOMODIMER WITH A ROD-AND-HINGE STRUCTURE HAVING DNA-BINDING AND ATP/GTP BINDING ACTIVITIES [J].
NIKI, H ;
IMAMURA, R ;
KITAOKA, M ;
YAMANAKA, K ;
OGURA, T ;
HIRAGA, S .
EMBO JOURNAL, 1992, 11 (13) :5101-5109
[38]   Different localization of SeqA-bound nascent DNA clusters and MukF-MukE-MukB complex in Escherichia coli cells [J].
Ohsumi, K ;
Yamazoe, M ;
Hiraga, S .
MOLECULAR MICROBIOLOGY, 2001, 40 (04) :835-845
[39]   STRUCTURE OF HISTONE-DEPLETED METAPHASE CHROMOSOMES [J].
PAULSON, JR ;
LAEMMLI, UK .
CELL, 1977, 12 (03) :817-828
[40]   DNA reshaping by MukB - Right-handed knotting, left-handed supercoiling [J].
Petrushenko, ZM ;
Lai, CH ;
Rai, R ;
Rybenkov, VV .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2006, 281 (08) :4606-4615