The pINDUCER lentiviral toolkit for inducible RNA interference in vitro and in vivo

被引:507
作者
Meerbrey, Kristen L. [2 ,3 ]
Hu, Guang [1 ]
Kessler, Jessica D. [2 ,3 ]
Roarty, Kevin [7 ]
Li, Mamie Z. [9 ,10 ]
Fang, Justin E. [2 ,3 ]
Herschkowitz, Jason I. [7 ]
Burrows, Anna E. [9 ,10 ]
Ciccia, Alberto [9 ,10 ]
Sun, Tingting [2 ]
Schmitt, Earlene M. [2 ,3 ]
Bernardi, Ronald J. [4 ]
Fu, Xiaoyong [5 ,7 ,8 ]
Bland, Christopher S. [6 ]
Cooper, Thomas A. [6 ]
Schiff, Rachel [5 ,7 ,8 ]
Rosen, Jeffrey M. [7 ]
Westbrook, Thomas F. [2 ,3 ,4 ]
Elledge, Stephen J. [9 ,10 ]
机构
[1] NIEHS, Mol Carcinogenesis Lab, Res Triangle Pk, NC 27709 USA
[2] Baylor Coll Med, Verna & Marrs McLean Dept Biochem & Mol Biol, Houston, TX 77030 USA
[3] Baylor Coll Med, Dept Mol & Human Genet, Houston, TX 77030 USA
[4] Baylor Coll Med, Dept Pediat, Houston, TX 77030 USA
[5] Baylor Coll Med, Dept Med, Houston, TX 77030 USA
[6] Baylor Coll Med, Dept Pathol & Immunol, Houston, TX 77030 USA
[7] Baylor Coll Med, Dept Mol & Cellular Biol, Houston, TX 77030 USA
[8] Baylor Coll Med, Lester & Sue Smith Breast Ctr, Houston, TX 77030 USA
[9] Harvard Univ, Brigham & Womens Hosp, Sch Med, Howard Hughes Med Inst, Boston, MA 02115 USA
[10] Harvard Univ, Brigham & Womens Hosp, Sch Med, Dept Genet, Boston, MA 02115 USA
基金
美国国家卫生研究院;
关键词
lentivirus; vector; SCREEN; TRANSFORMATION; TRANSGENE; GENOME; MOUSE; GENE;
D O I
10.1073/pnas.1019736108
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The discovery of RNAi has revolutionized loss-of-function genetic studies in mammalian systems. However, significant challenges still remain to fully exploit RNAi for mammalian genetics. For instance, genetic screens and in vivo studies could be broadly improved by methods that allow inducible and uniform gene expression control. To achieve this, we built the lentiviral pINDUCER series of expression vehicles for inducible RNAi in vivo. Using a multicistronic design, pINDUCER vehicles enable tracking of viral transduction and shRNA or cDNA induction in a broad spectrum of mammalian cell types in vivo. They achieve this uniform temporal, dose-dependent, and reversible control of gene expression across heterogenous cell populations via fluorescence-based quantification of reverse tet-transactivator expression. This feature allows isolation of cell populations that exhibit a potent, inducible target knockdown in vitro and in vivo that can be used in human xenotransplantation models to examine cancer drug targets.
引用
收藏
页码:3665 / 3670
页数:6
相关论文
共 21 条
[11]   A resource for large-scale RNA-interference-based screens in mammals [J].
Paddison, PJ ;
Silva, JM ;
Conklin, DS ;
Schlabach, M ;
Li, MM ;
Aruleba, S ;
Balija, V ;
O'Shaughnessy, A ;
Gnoj, L ;
Scobie, K ;
Chang, K ;
Westbrook, T ;
Cleary, M ;
Sachidanandam, R ;
McCombie, WR ;
Elledge, SJ ;
Hannon, GJ .
NATURE, 2004, 428 (6981) :427-431
[12]   Loss of transcriptional activity of a transgene is accompanied by DNA methylation and histone deacetylation and is prevented by insulators [J].
Pikaart, MI ;
Recillas-Targa, F ;
Felsenfeld, G .
GENES & DEVELOPMENT, 1998, 12 (18) :2852-2862
[13]   Cancer proliferation gene discovery through functional Genomics [J].
Schlabach, Michael R. ;
Luo, Ji ;
Solimini, Nicole L. ;
Hu, Guang ;
Xu, Qikai ;
Li, Mamie Z. ;
Zhao, Zhenming ;
Smogorzewska, Agata ;
Sowa, Mathew E. ;
Ang, Xiaolu L. ;
Westbrook, Thomas F. ;
Liang, Anthony C. ;
Chang, Kenneth ;
Hackett, Jennifer A. ;
Harper, J. Wade ;
Hannon, Gregory J. ;
Elledge, Stephen J. .
SCIENCE, 2008, 319 (5863) :620-624
[14]   Synthetic Lethal Interaction between Oncogenic KRAS Dependency and STK33 Suppression in Human Cancer Cells [J].
Scholl, Claudia ;
Froehling, Stefan ;
Dunn, Ian F. ;
Schinzel, Anna C. ;
Barbie, David A. ;
Kim, So Young ;
Silver, Serena J. ;
Tamayo, Pablo ;
Wadlow, Raymond C. ;
Ramaswamy, Sridhar ;
Doehner, Konstanze ;
Bullinger, Lars ;
Sandy, Peter ;
Boehm, Jesse S. ;
Root, David E. ;
Jacks, Tyler ;
Hahn, William C. ;
Gilliland, D. Gary .
CELL, 2009, 137 (05) :821-834
[15]   A single lentiviral vector platform for microRNA-based conditional RNA interference and coordinated transgene expression [J].
Shin, Kum-Joo ;
Wall, Estelle A. ;
Zavzavadjian, Joelle R. ;
Santat, Leah A. ;
Liu, Jamie ;
Hwang, Jong-Ik ;
Rebres, Robert ;
Roach, Tamara ;
Seaman, William ;
Simon, Melvin I. ;
Fraser, Iain D. C. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2006, 103 (37) :13759-13764
[16]   Second-generation shRNA libraries covering the mouse and human genomes [J].
Silva, JM ;
Li, MZ ;
Chang, K ;
Ge, W ;
Golding, MC ;
Rickles, RJ ;
Siolas, D ;
Hu, G ;
Paddison, PJ ;
Schlabach, MR ;
Sheth, N ;
Bradshaw, J ;
Burchard, J ;
Kulkarni, A ;
Cavet, G ;
Sachidanandam, R ;
McCombie, WR ;
Cleary, MA ;
Elledge, SJ ;
Hannon, GJ .
NATURE GENETICS, 2005, 37 (11) :1281-1288
[17]   A lentiviral microRNA-based system for single-copy polymerase II-regulated RNA interference in mammalian cells [J].
Stegmeier, F ;
Hu, G ;
Rickles, RJ ;
Hannon, GJ ;
Elledge, SJ .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2005, 102 (37) :13212-13217
[18]   A genetic screen for candidate tumor suppressors identifies REST [J].
Westbrook, TF ;
Martin, ES ;
Schlabach, MR ;
Leng, YM ;
Liang, AC ;
Feng, B ;
Zhao, JJ ;
Roberts, TM ;
Mandel, G ;
Hannon, GJ ;
DePinho, RA ;
Chin, L ;
Elledge, SJ .
CELL, 2005, 121 (06) :837-848
[19]   An Oncogenomics-Based In Vivo RNAi Screen Identifies Tumor Suppressors in Liver Cancer [J].
Zender, Lars ;
Xue, Wen ;
Zuber, Johannes ;
Semighini, Camile P. ;
Krasnitz, Alexander ;
Ma, Beicong ;
Zender, Peggy ;
Kubicka, Stefan ;
Luk, John M. ;
Schirmacher, Peter ;
McCombie, W. Richard ;
Wigler, Michael ;
Hicks, James ;
Hannon, Gregory J. ;
Powers, Scott ;
Lowe, Scott W. .
CELL, 2008, 135 (05) :852-864
[20]   Human mammary epithelial cell transformation through the activation of phosphatidylinositol 3-kinase [J].
Zhao, JJ ;
Gjoerup, OV ;
Subramanian, RR ;
Cheng, Y ;
Chen, W ;
Roberts, TM ;
Hahn, WC .
CANCER CELL, 2003, 3 (05) :483-495