kinITC: A New Method for Obtaining Joint Thermodynamic and Kinetic Data by Isothermal Titration Calorimetry

被引:133
作者
Burnouf, Dominique [1 ]
Ennifar, Eric [1 ]
Guedich, Sondes [1 ]
Puffer, Barbara [1 ]
Hoffmann, Guillaume [1 ]
Bec, Guillaume [1 ]
Disdier, Francois [1 ]
Baltzinger, Mireille [1 ]
Dumas, Philippe [1 ]
机构
[1] Univ Strasbourg, Architecture & Reactivite ARN, Inst Biol Mol & Cellulaire, CNRS, F-67084 Strasbourg, France
关键词
SURFACE-PLASMON RESONANCE; LIGAND-BINDING; NONNUCLEOSIDE INHIBITOR; SENSING RIBOSWITCH; ESCHERICHIA-COLI; DNA; QUANTIFICATION; BIOSYNTHESIS; RNA;
D O I
10.1021/ja209057d
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Isothermal titration calorimetry (ITC) is the method of choice for obtaining thermodynamic data on a great variety of systems. Here we show that modern ITC apparatus and new processing methods allow researchers to obtain a complete kinetic description of systems more diverse than previously thought, ranging from simple ligand binding to complex RNA folding. We illustrate these new features with a simple case (HIV-1 reverse transcriptase/inhibitor interaction) and with the more complex case of the folding of a riboswitch triggered by the binding of its ligand. The originality of the new kinITC method lies in its ability to dissect, both thermodynamically and kinetically, the two components: primary ligand binding and subsequent RNA folding. We are not aware of another single method that can yield, in a simple way, such deep insight into a composite process. Our study also rationalizes common observations from daily ITC use.
引用
收藏
页码:559 / 565
页数:7
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