Fine-mapping, genomic organization, and transcript analysis of the human ubiquitin-conjugating enzyme gene UBE2L3

被引:18
作者
Moynihan, TP
Cole, CG
Dunham, L
O'Neil, L
Markham, AF
Robinson, PA
机构
[1] Univ Leeds, St Jamess Univ Hosp, Mol Med Unit, Leeds LS9 7TF, W Yorkshire, England
[2] Sanger Ctr, Cambridge CB10 1SA, England
基金
英国惠康基金;
关键词
D O I
10.1006/geno.1998.5257
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
The human UBE2L3 gene encodes the ubiquitin-conjugating enzyme UbcH7, demonstrated to participate in the ubiquitination of p53, c-Fos, and NF-kappa B in vitro. We report the fine-mapping of this four-exon gene to chromosome 22q11.2. We have constructed a comprehensive genomic clone contig across this gene, demonstrating that the gene lies adjacent to the microsatellite marker D22S446 and spans approximately 57 kb. Four mRNA species are transcribed from this gene, differing in the length of their 3' UTR. Sequence comparison of the UBE2L3 cDNA with its murine homologue reveals a remarkably high degree of sequence conservation within the 3'UTR. (C) 1998 Academic Press.
引用
收藏
页码:124 / 127
页数:4
相关论文
共 15 条
[1]   TOWARD A PHYSICAL MAP OF THE GENOME OF THE NEMATODE CAENORHABDITIS-ELEGANS [J].
COULSON, A ;
SULSTON, J ;
BRENNER, S ;
KARN, J .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1986, 83 (20) :7821-7825
[2]  
FROHMAN MA, 1994, PCR METH APPL, V4, P40
[3]   Provirus integration into a gene encoding a ubiquitin-conjugating enzyme results in a placental defect and embryonic lethality [J].
Harbers, K ;
Muller, U ;
Grams, A ;
Li, E ;
Jaenisch, R ;
Franz, T .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1996, 93 (22) :12412-12417
[4]   Ubiquitin-dependent protein degradation [J].
Hochstrasser, M .
ANNUAL REVIEW OF GENETICS, 1996, 30 :405-439
[5]  
IOANNOU PA, 1994, NAT GENET, V6, P84, DOI 10.1038/ng0194-84
[6]   THE ORGANIZATION OF THE HUMAN-IMMUNOGLOBULIN-LAMBDA GENE LOCUS [J].
KAWASAKI, K ;
MINOSHIMA, S ;
SCHOOLER, K ;
KUDOH, J ;
ASAKAWA, S ;
DEJONG, PJ ;
SHIMIZU, N .
GENOME RESEARCH, 1995, 5 (02) :125-135
[7]   A bacterial artificial chromosome-based framework contig map of human chromosome 22q [J].
Kim, UJ ;
Shizuya, H ;
Kang, HL ;
Choi, SS ;
Garrett, CL ;
Smink, LJ ;
Birren, BW ;
Korenberg, JR ;
Dunham, I ;
Simon, MI .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1996, 93 (13) :6297-6301
[8]   Construction and utility of a human chromosome 22-specific Fosmid library [J].
Kim, UJ ;
Shizuya, H ;
Sainz, J ;
Garnes, J ;
Pulst, SM ;
deJong, P ;
Simon, MI .
GENETIC ANALYSIS-BIOMOLECULAR ENGINEERING, 1995, 12 (02) :81-84
[9]   Characterization of a human ubiquitin-conjugating enzyme gene UBE2L3 [J].
Moynihan, TP ;
Ardley, HC ;
Leek, JP ;
Thompson, J ;
Brindle, NS ;
Markham, AF ;
Robinson, PA .
MAMMALIAN GENOME, 1996, 7 (07) :520-525
[10]   Cloning of human ubiquitin-conjugating enzymes UbcH6 and UbcH7 (E2-F1) and characterization of their interaction with E6-AP and RSP5 [J].
Nuber, U ;
Schwarz, S ;
Kaiser, P ;
Schneider, R ;
Scheffner, M .
JOURNAL OF BIOLOGICAL CHEMISTRY, 1996, 271 (05) :2795-2800