Crystal structure of the N-terminal dimerisation domain of VicH, the H-NS-like protein of Vibrio cholerae

被引:40
作者
Cerdan, R
Bloch, V
Yang, YS
Bertin, P
Dumas, C
Rimsky, S
Kochoyan, M
Arold, ST
机构
[1] Univ Montpellier I, INSERM, CNRS, UMR 5048,U554,Ctr Biochim Struct, F-34090 Montpellier, France
[2] Inst Gustave Roussy, CNRS, UMR 8532, LBPA, F-94805 Villejuif, France
[3] Univ Louis Pasteur Strasbourg 1, F-67000 Strasbourg, France
关键词
H-NS protein; Vibrio cholerae; X-ray structure; DNA-binding protein;
D O I
10.1016/j.jmb.2003.09.051
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The histone-like nucleoid structuring (H-NS) protein is a global modulator of gene expression in Gram-negative bacteria. Vices, the H-NS protein of Vibrio cholerae, regulates the expression of certain major virulence determinants implicated in the pathogenesis of cholera. We present here the 2.5 Angstrom crystal structure of the N-terminal oligomerisation domain of Vices (Vices Nt). VicH_Nt adopts the same fold and dimeric assembly as the NMR structure of Escherichia coli H-NS Nt, thus validating this fold against conflicting data. The structural similarity of V. cholerae Vices Nt and E. coli H-NS Nt, despite differences in origin, system of expression, experimental conditions and techniques used, indicates that the fold determined in our studies is robust to experimental conditions. Structural analysis and homology modelling were carried out to further elucidate the molecular basis of the functional polyvalence of the N-terminal domain. Our analysis of members of the H-NS superfamily supports the suggestion that the oligomerisation function of H-NS Nt is conserved even in more distantly related proteins. (C) 2003 Elsevier Ltd. All rights reserved.
引用
收藏
页码:179 / 185
页数:7
相关论文
共 30 条
  • [1] The degree of oligomerization of the H-NS nucleoid structuring protein is related to specific binding to DNA
    Badaut, C
    Williams, R
    Arluison, V
    Bouffartigues, E
    Robert, B
    Buc, H
    Rimsky, S
    [J]. JOURNAL OF BIOLOGICAL CHEMISTRY, 2002, 277 (44) : 41657 - 41666
  • [2] THE CCP4 SUITE - PROGRAMS FOR PROTEIN CRYSTALLOGRAPHY
    BAILEY, S
    [J]. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1994, 50 : 760 - 763
  • [3] The structural and functional organization of H-NS-like proteins is evolutionarily conserved in Gram-negative bacteria
    Bertin, P
    Benhabiles, N
    Krin, E
    Laurent-Winter, C
    Tendeng, C
    Turlin, E
    Thomas, A
    Danchin, A
    Brasseur, R
    [J]. MOLECULAR MICROBIOLOGY, 1999, 31 (01) : 319 - 329
  • [4] The H-NS dimerization domain defines a new fold contributing to DNA recognition
    Bloch, V
    Yang, YS
    Margeat, E
    Chavanieu, A
    Augé, MT
    Robert, B
    Arold, S
    Rimsky, S
    Kochoyan, M
    [J]. NATURE STRUCTURAL BIOLOGY, 2003, 10 (03) : 212 - 218
  • [5] Crystallography & NMR system:: A new software suite for macromolecular structure determination
    Brunger, AT
    Adams, PD
    Clore, GM
    DeLano, WL
    Gros, P
    Grosse-Kunstleve, RW
    Jiang, JS
    Kuszewski, J
    Nilges, M
    Pannu, NS
    Read, RJ
    Rice, LM
    Simonson, T
    Warren, GL
    [J]. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1998, 54 : 905 - 921
  • [6] ACCURATE BOND AND ANGLE PARAMETERS FOR X-RAY PROTEIN-STRUCTURE REFINEMENT
    ENGH, RA
    HUBER, R
    [J]. ACTA CRYSTALLOGRAPHICA SECTION A, 1991, 47 : 392 - 400
  • [7] H-NS oligomerization domain structure reveals the mechanism for high order self-association of the intact protein
    Esposito, D
    Petrovic, A
    Harris, R
    Ono, S
    Eccleston, JF
    Mbabaali, A
    Haq, I
    Higgins, CF
    Hinton, JCD
    Driscoll, PC
    Ladbury, JE
    [J]. JOURNAL OF MOLECULAR BIOLOGY, 2002, 324 (04) : 841 - 850
  • [8] Thermoregulation of Shigella and Escherichia coli EIEC pathogenicity.: A temperature-dependent structural transition of DNA modulates accessibility of virF promoter to transcriptional repressor H-NS
    Falconi, M
    Colonna, B
    Prosseda, G
    Micheli, G
    Gualerzi, CO
    [J]. EMBO JOURNAL, 1998, 17 (23) : 7033 - 7043
  • [9] TRANSCRIPTIONAL SILENCING AND THERMOREGULATION OF GENE-EXPRESSION IN ESCHERICHIA-COLI
    GORANSSON, M
    SONDEN, B
    NILSSON, P
    DAGBERG, B
    FORSMAN, K
    EMANUELSSON, K
    UHLIN, BE
    [J]. NATURE, 1990, 344 (6267) : 682 - 685
  • [10] Large-scale monitoring of pleiotropic regulation of gene expression by the prokaryotic nucleoid-associated protein, H-NS
    Hommais, F
    Krin, E
    Laurent-Winter, C
    Soutourina, O
    Malpertuy, A
    Le Caer, JP
    Danchin, A
    Bertin, P
    [J]. MOLECULAR MICROBIOLOGY, 2001, 40 (01) : 20 - 36