Strategies for analysis of glycoprotein glycosylation

被引:243
作者
Geyer, Hildegard [1 ]
Geyer, Rudolf [1 ]
机构
[1] Univ Giessen, Inst Biochem, Fac Med, D-35392 Giessen, Germany
来源
BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS | 2006年 / 1764卷 / 12期
关键词
glycoproteomics; glycosylation analysis; lectin; mass spectrometry; oligosaccharide profiling; review;
D O I
10.1016/j.bbapap.2006.10.007
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Glycoproteins are known to exhibit multiple biological functions. In order to assign distinct functional properties to defined structural features, detailed information on the respective carbohydrate moieties is required. Chemical and biochemical analyses, however, are often impeded by the small amounts of sample available and the vast structural heterogeneity of these glycans, thus necessitating highly sensitive and efficient methods for detection, separation and structural investigation. The aim of this article is to briefly review suitable strategies for characterization of glycosylation at the levels of intact proteins, glycopeptides and free oligosaccharides. Furthermore, methods commonly used for isolation, fractionation and carbohydrate structure analysis of liberated glycoprotein glycans are discussed in the context of potential applications in glycoproteomics. (c) 2006 Elsevier B.V. All rights reserved.
引用
收藏
页码:1853 / 1869
页数:17
相关论文
共 217 条
[1]   Tools for glycoproteomic analysis: Size exclusion chromatography facilitates identification of tryptic glycopeptides with N-linked glycosylation sites [J].
Alvarez-Manilla, G ;
Atwood, J ;
Guo, Y ;
Warren, NL ;
Orlando, R ;
Pierce, M .
JOURNAL OF PROTEOME RESEARCH, 2006, 5 (03) :701-708
[2]  
Alving K, 1999, J MASS SPECTROM, V34, P395, DOI 10.1002/(SICI)1096-9888(199904)34:4<395::AID-JMS771>3.0.CO
[3]  
2-1
[4]   Determination of N-glycosylation sites and site heterogeneity in glycoproteins [J].
An, HJ ;
Peavy, TR ;
Hedrick, JL ;
Lebrilla, CB .
ANALYTICAL CHEMISTRY, 2003, 75 (20) :5628-5637
[5]   Ion suppression in mass spectrometry [J].
Annesley, TM .
CLINICAL CHEMISTRY, 2003, 49 (07) :1041-1044
[6]   REGULATION OF THE GLYCOSYLATIONS OF COLLAGEN HYDROXYLYSINE IN CHICK-EMBRYO TENDON AND CARTILAGE CELLS [J].
ANTTINEN, H ;
HULKKO, A .
BIOCHIMICA ET BIOPHYSICA ACTA, 1980, 632 (03) :417-427
[7]   Advances in fluorescence derivatization methods for high-performance liquid chromatographic analysis of glycoprotein carbohydrates [J].
Anumula, KR .
ANALYTICAL BIOCHEMISTRY, 2006, 350 (01) :1-23
[8]   On the frequency of protein glycosylation, as deduced from analysis of the SWISS-PROT database [J].
Apweiler, R ;
Hermjakob, H ;
Sharon, N .
BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS, 1999, 1473 (01) :4-8
[9]   Congruent strategies for carbohydrate sequencing.: 1.: Mining structural details by MSn [J].
Ashline, D ;
Singh, S ;
Hanneman, A ;
Reinhold, V .
ANALYTICAL CHEMISTRY, 2005, 77 (19) :6250-6262
[10]   NONSELECTIVE AND EFFICIENT FLUORESCENT LABELING OF GLYCANS USING 2-AMINO BENZAMIDE AND ANTHRANILIC ACID [J].
BIGGE, JC ;
PATEL, TP ;
BRUCE, JA ;
GOULDING, PN ;
CHARLES, SM ;
PAREKH, RB .
ANALYTICAL BIOCHEMISTRY, 1995, 230 (02) :229-238