Integrated Molecular Characterization of Uterine Carcinosarcoma

被引:372
作者
Cherniack, Andrew D. [1 ,2 ]
Shen, Hui [3 ]
Walter, Vonn [4 ]
Stewart, Chip [1 ,2 ]
Murray, Bradley A. [1 ,2 ]
Bowlby, Reanne [5 ]
Hu, Xin [6 ]
Ling, Shiyun [6 ]
Soslow, Robert A. [7 ]
Broaddus, Russell R. [6 ]
Zuna, Rosemary E. [8 ]
Robertson, Gordon [5 ]
Laird, Peter W. [3 ]
Kucherlapati, Raju [9 ]
Mills, Gordon B. [6 ]
Weinstein, John N. [6 ]
Zhang, Jiashan [10 ]
Akbani, Rehan [6 ]
Levine, Douglas A. [11 ]
机构
[1] MIT, Eli & Edythe L Broad Inst, Cambridge, MA 02142 USA
[2] Harvard Univ, Cambridge, MA 02142 USA
[3] Van Andel Res Inst, Ctr Epigenet, Grand Rapids, MI 49503 USA
[4] Univ North Carolina Chapel Hill, Lineberger Comprehens Canc Ctr, Chapel Hill, NC 27599 USA
[5] BC Canc Agcy, Canadas Michael Smith Genome Sci Ctr, Vancouver, BC V5Z 4S6, Canada
[6] Univ Texas MD Anderson Canc Ctr, Houston, TX 77030 USA
[7] Mem Sloan Kettering Canc Ctr, New York, NY 10065 USA
[8] Univ Oklahoma, Hlth Sci Ctr, Stephenson Canc Ctr, Oklahoma City, OK 73104 USA
[9] Harvard Med Sch, Boston, MA 02115 USA
[10] NCI, Bethesda, MD 20892 USA
[11] NYU, Langone Med Ctr, Laura & Isaac Perlmutter Canc Ctr, 550 1St Ave, New York, NY 10016 USA
关键词
EPITHELIAL-MESENCHYMAL TRANSITION; MIXED MULLERIAN TUMORS; COPY-NUMBER ALTERATION; ENDOMETRIAL CARCINOMAS; SENSITIZES CELLS; CANCER; HETEROGENEITY; ARID1A; GENES; RESISTANCE;
D O I
10.1016/j.ccell.2017.02.010
中图分类号
R73 [肿瘤学];
学科分类号
100214 [肿瘤学];
摘要
We performed genomic, epigenomic, transcriptomic, and proteomic characterizations of uterine carcinosarcomas (UCSs). Cohort samples had extensive copy-number alterations and highly recurrent somatic mutations. Frequent mutations were found in TP53, PTEN, PIK3CA, PPP2R1A, FBXW7, and KRAS, similar to endometrioid and serous uterine carcinomas. Transcriptome sequencing identified a strong epithelial-to-mesenchymal transition (EMT) gene signature in a subset of cases that was attributable to epigenetic alterations at microRNA promoters. The range of EMT scores in UCS was the largest among all tumor types studied via The Cancer Genome Atlas. UCSs shared proteomic features with gynecologic carcinomas and sarcomas with intermediate EMT features. Multiple somatic mutations and copy-number alterations in genes that are therapeutic targets were identified.
引用
收藏
页码:411 / 423
页数:13
相关论文
共 43 条
[1]
Abeln ECA, 1997, J PATHOL, V183, P424
[2]
A pan-cancer proteomic perspective on The Cancer Genome Atlas [J].
Akbani, Rehan ;
Ng, Patrick Kwok Shing ;
Werner, Henrica M. J. ;
Shahmoradgoli, Maria ;
Zhang, Fan ;
Ju, Zhenlin ;
Liu, Wenbin ;
Yang, Ji-Yeon ;
Yoshihara, Kosuke ;
Li, Jun ;
Ling, Shiyun ;
Seviour, Elena G. ;
Ram, Prahlad T. ;
Minna, John D. ;
Diao, Lixia ;
Tong, Pan ;
Heymach, John V. ;
Hill, Steven M. ;
Dondelinger, Frank ;
Stadler, Nicolas ;
Byers, Lauren A. ;
Meric-Bernstam, Funda ;
Weinstein, John N. ;
Broom, Bradley M. ;
Verhaak, Roeland G. W. ;
Liang, Han ;
Mukherjee, Sach ;
Lu, Yiling ;
Mills, Gordon B. .
NATURE COMMUNICATIONS, 2014, 5
[3]
Integrated genomic analyses of ovarian carcinoma [J].
Bell, D. ;
Berchuck, A. ;
Birrer, M. ;
Chien, J. ;
Cramer, D. W. ;
Dao, F. ;
Dhir, R. ;
DiSaia, P. ;
Gabra, H. ;
Glenn, P. ;
Godwin, A. K. ;
Gross, J. ;
Hartmann, L. ;
Huang, M. ;
Huntsman, D. G. ;
Iacocca, M. ;
Imielinski, M. ;
Kalloger, S. ;
Karlan, B. Y. ;
Levine, D. A. ;
Mills, G. B. ;
Morrison, C. ;
Mutch, D. ;
Olvera, N. ;
Orsulic, S. ;
Park, K. ;
Petrelli, N. ;
Rabeno, B. ;
Rader, J. S. ;
Sikic, B. I. ;
Smith-McCune, K. ;
Sood, A. K. ;
Bowtell, D. ;
Penny, R. ;
Testa, J. R. ;
Chang, K. ;
Dinh, H. H. ;
Drummond, J. A. ;
Fowler, G. ;
Gunaratne, P. ;
Hawes, A. C. ;
Kovar, C. L. ;
Lewis, L. R. ;
Morgan, M. B. ;
Newsham, I. F. ;
Santibanez, J. ;
Reid, J. G. ;
Trevino, L. R. ;
Wu, Y. -Q. ;
Wang, M. .
NATURE, 2011, 474 (7353) :609-615
[4]
Oncogenic RIT1 mutations in lung adenocarcinoma [J].
Berger, A. H. ;
Imielinski, M. ;
Duke, F. ;
Wala, J. ;
Kaplan, N. ;
Shi, G-X ;
Andres, D. A. ;
Meyerson, M. .
ONCOGENE, 2014, 33 (35) :4418-4423
[5]
Synthetic lethality by targeting EZH2 methyltransferase activity in ARID1A-mutated cancers [J].
Bitler, Benjamin G. ;
Aird, Katherine M. ;
Garipov, Azat ;
Li, Hua ;
Amatangelo, Michael ;
Kossenkov, Andrew V. ;
Schultz, David C. ;
Liu, Qin ;
Shih, Ie-Ming ;
Conejo-Garcia, Jose R. ;
Speicher, David W. ;
Zhang, Rugang .
NATURE MEDICINE, 2015, 21 (03) :231-+
[6]
A Clinical and Biological Comparison Between Malignant Mixed Mullerian Tumors and Grade 3 Endometrioid Endometrial Carcinomas [J].
Bland, Amy E. ;
Stone, Rebecca ;
Heuser, Cara ;
Shu, Jianfen ;
Jazaeri, Amir ;
Shutter, Jamie ;
Atkins, Kristin ;
Rice, Laurel .
INTERNATIONAL JOURNAL OF GYNECOLOGICAL CANCER, 2009, 19 (02) :261-265
[7]
Etiologic heterogeneity in endometrial cancer: Evidence from a Gynecologic Oncology Group trial [J].
Brinton, Louise A. ;
Felix, Ashley S. ;
McMeekin, D. Scott ;
Creasman, William T. ;
Sherman, Mark E. ;
Mutch, David ;
Cohn, David E. ;
Walker, Joan L. ;
Moore, Richard G. ;
Downs, Levi S. ;
Soslow, Robert A. ;
Zaino, Richard .
GYNECOLOGIC ONCOLOGY, 2013, 129 (02) :277-284
[8]
An Epithelial-Mesenchymal Transition Gene Signature Predicts Resistance to EGFR and PI3K Inhibitors and Identifies Axl as a Therapeutic Target for Overcoming EGFR Inhibitor Resistance [J].
Byers, Lauren Averett ;
Diao, Lixia ;
Wang, Jing ;
Saintigny, Pierre ;
Girard, Luc ;
Peyton, Michael ;
Shen, Li ;
Fan, Youhong ;
Giri, Uma ;
Tumula, Praveen K. ;
Nilsson, Monique B. ;
Gudikote, Jayanthi ;
Tran, Hai ;
Cardnell, Robert J. G. ;
Bearss, David J. ;
Warner, Steven L. ;
Foulks, Jason M. ;
Kanner, Steven B. ;
Gandhi, Varsha ;
Krett, Nancy ;
Rosen, Steven T. ;
Kim, Edward S. ;
Herbst, Roy S. ;
Blumenschein, George R. ;
Lee, J. Jack ;
Lippman, Scott M. ;
Ang, K. Kian ;
Mills, Gordon B. ;
Hong, Waun K. ;
Weinstein, John N. ;
Wistuba, Ignacio I. ;
Coombes, Kevin R. ;
Minna, John D. ;
Heymach, John V. .
CLINICAL CANCER RESEARCH, 2013, 19 (01) :279-290
[9]
Absolute quantification of somatic DNA alterations in human cancer [J].
Carter, Scott L. ;
Cibulskis, Kristian ;
Helman, Elena ;
McKenna, Aaron ;
Shen, Hui ;
Zack, Travis ;
Laird, Peter W. ;
Onofrio, Robert C. ;
Winckler, Wendy ;
Weir, Barbara A. ;
Beroukhim, Rameen ;
Pellman, David ;
Levine, Douglas A. ;
Lander, Eric S. ;
Meyerson, Matthew ;
Getz, Gad .
NATURE BIOTECHNOLOGY, 2012, 30 (05) :413-+
[10]
Expression profiles of carcinosarcoma of the uterine corpus-are these similar to carcinoma or sarcoma? [J].
Chiyoda, Tatsuyuki ;
Tsuda, Hiroshi ;
Tanaka, Hideo ;
Kataoka, Fumio ;
Nomura, Hiroyuki ;
Nishimura, Sadako ;
Takano, Masashi ;
Susumu, Nobuyuki ;
Saya, Hideyuki ;
Aoki, Daisuke .
GENES CHROMOSOMES & CANCER, 2012, 51 (03) :229-239