Protein-protein interactions as targets for small molecule drug discovery

被引:139
作者
Fry, David C. [1 ]
机构
[1] Hoffmann La Roche Inc, Roche Res Ctr, Nutley, NJ 07110 USA
关键词
protein-protein interactions; PPI; drug discovery; peptidomimetics;
D O I
10.1002/bip.20608
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Protein-protein interactions represent a highly populated class of targets for drug discovery. However, such systems present a number of unique challenges. This review presents an analysis of individual protein-protein interaction systems which have recently yielded success in discovering drug-like inhibitors. The structural characteristics of the protein binding sites and the attributes of the small molecule ligands are focused upon, in an attempt to derive commonly shared principles that may be of general usefulness in future drug discovery efforts within this target class. (c) 2006 Wiley Periodicals, Inc.
引用
收藏
页码:535 / 552
页数:18
相关论文
共 57 条
  • [1] Binding of small molecules to an adaptive protein-protein interface
    Arkin, MR
    Randal, M
    DeLano, WL
    Hyde, J
    Luong, TN
    Oslob, JD
    Raphael, DR
    Taylor, L
    Wang, J
    McDowell, RS
    Wells, JA
    Braisted, AC
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2003, 100 (04) : 1603 - 1608
  • [2] Discovery of a potent small molecule IL-2 inhibitor through fragment assembly
    Braisted, AC
    Oslob, JD
    Delano, WL
    Hyde, J
    McDowell, RS
    Waal, N
    Yu, C
    Arkin, MR
    Raimundo, BC
    [J]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2003, 125 (13) : 3714 - 3715
  • [3] 3-DIMENSIONAL STRUCTURE OF INTERLEUKIN-2
    BRANDHUBER, BJ
    BOONE, T
    KENNEY, WC
    MCKAY, DB
    [J]. SCIENCE, 1987, 238 (4834) : 1707 - 1709
  • [4] N-acyl-L-phenylalanine derivatives as potent VLA-4 antagonists that mimic a cyclic peptide conformation
    Chen, L
    Tilley, J
    Trilles, RV
    Yun, WY
    Fry, D
    Cook, C
    Rowan, K
    Schwinge, V
    Campbell, R
    [J]. BIOORGANIC & MEDICINAL CHEMISTRY LETTERS, 2002, 12 (02) : 137 - 140
  • [5] A HOT-SPOT OF BINDING-ENERGY IN A HORMONE-RECEPTOR INTERFACE
    CLACKSON, T
    WELLS, JA
    [J]. SCIENCE, 1995, 267 (5196) : 383 - 386
  • [6] Structure of nitric oxide synthase oxygenase dimer with pterin and substrate
    Crane, BR
    Arvai, AS
    Ghosh, DK
    Wu, CQ
    Getzoff, ED
    Stuehr, DJ
    Tainer, JA
    [J]. SCIENCE, 1998, 279 (5359) : 2121 - 2126
  • [7] Structure of an allosteric inhibitor of LFA-1 bound to the I-domain studied by crystallography, NMR, and calorimetry
    Crump, MP
    Ceska, TA
    Spyracopoulos, L
    Henry, A
    Archibald, SC
    Alexander, R
    Taylor, RJ
    Findlow, SC
    O'Connell, J
    Robinson, MK
    Shock, A
    [J]. BIOCHEMISTRY, 2004, 43 (09) : 2394 - 2404
  • [8] Nonpeptide GPIIb/IIIa inhibitors .10. Centrally constrained alpha-sulfonamides are potent inhibitors of platelet aggregation
    Egbertson, MS
    Hartman, GD
    Gould, RJ
    Bednar, B
    Bednar, RA
    Cook, JJ
    Gaul, SL
    Holahan, MA
    Libby, LA
    Lynch, JJ
    Lynch, RJ
    Sitko, GR
    Stranieri, MT
    Vassallo, LM
    [J]. BIOORGANIC & MEDICINAL CHEMISTRY LETTERS, 1996, 6 (21) : 2519 - 2524
  • [9] Non-peptide GPIIb IIIa inhibitors.: 20.: Centrally constrained thienothiophene α-sulfonamides are potent, long acting in vivo inhibitors of platelet aggregation
    Egbertson, MS
    Cook, JJ
    Bednar, B
    Prugh, JD
    Bednar, RA
    Gaul, SL
    Gould, RJ
    Hartman, GD
    Homnick, CF
    Holahan, MA
    Libby, LA
    Lynch, JJ
    Lynch, RJ
    Sitko, GR
    Stranieri, MT
    Vassallo, LM
    [J]. JOURNAL OF MEDICINAL CHEMISTRY, 1999, 42 (13) : 2409 - 2421
  • [10] NMR characterization of interleukin-2 in complexes with the IL-2Rα receptor component, and with low molecular weight compounds that inhibit the IL-2/IL-Rα interaction
    Emerson, SD
    Palermo, R
    Liu, CM
    Tilley, JW
    Chen, L
    Danho, W
    Madison, VS
    Greeley, DN
    Ju, G
    Fry, DC
    [J]. PROTEIN SCIENCE, 2003, 12 (04) : 811 - 822