Evolutionary Analysis of Mammalian Enamelin, The Largest Enamel Protein, Supports a Crucial Role for the 32-kDa Peptide and Reveals Selective Adaptation in Rodents and Primates

被引:41
作者
Al-Hashimi, Nawfal [1 ]
Sire, Jean-Yves [1 ]
Delgado, Sidney [1 ]
机构
[1] Univ Paris 06, UMR Systemat Adaptat Evolut 7138, F-75005 Paris, France
关键词
Enamelin; Evolution; Teeth; Mammals; Purifying selection; Positive selection; DOMINANT AMELOGENESIS IMPERFECTA; PORCINE SECRETORY ENAMEL; 32 KDA ENAMELIN; MOLECULAR EVIDENCE; MITOCHONDRIAL-DNA; SIGNAL SEQUENCES; MATRIX PROTEINS; CALCIUM-BINDING; MESSENGER-RNAS; DENTAL ENAMEL;
D O I
10.1007/s00239-009-9302-x
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Enamelin (ENAM) plays an important role in the mineralization of the forming enamel matrix. We have performed an evolutionary analysis of mammalian ENAM to identify highly conserved residues or regions that could have important function (selective pressure), to predict mutations that could be associated with amelogenesis imperfecta in humans, and to identify possible adaptive evolution of ENAM during 200 million years ago of mammalian evolution. In order to fulfil these objectives, we obtained 36-ENAM sequences that are representative of the mammalian lineages. Our results show a remarkably high conservation pattern in the region of the 32-kDa fragment of ENAM, especially its phosphorylation, glycosylation, and proteolytic sites. In primates and rodents we also identified several sites under positive selection, which could indicate recent evolutionary changes in ENAM function. Furthermore, the analysis of the unusual signal peptide provided new insights on the possible regulation of ENAM secretion, a hypothesis that should be tested in the near future. Taken together, these findings improve our understanding of ENAM evolution and provide new information that would be useful for further investigation of ENAM function as well as for the validation of mutations leading to amelogenesis imperfecta.
引用
收藏
页码:635 / 656
页数:22
相关论文
共 86 条
[71]   ESTIMATION OF THE NUMBER OF NUCLEOTIDE SUBSTITUTIONS IN THE CONTROL REGION OF MITOCHONDRIAL-DNA IN HUMANS AND CHIMPANZEES [J].
TAMURA, K ;
NEI, M .
MOLECULAR BIOLOGY AND EVOLUTION, 1993, 10 (03) :512-526
[72]   PROPERTIES OF PHOSPHORYLATED 32-KD NONAMELOGENIN PROTEINS ISOLATED FROM PORCINE SECRETORY ENAMEL [J].
TANABE, T ;
AOBA, T ;
MORENO, EC ;
FUKAE, M ;
SHIMUZU, M .
CALCIFIED TISSUE INTERNATIONAL, 1990, 46 (03) :205-215
[73]   DEGRADATION OF ENAMELINS BY PROTEINASES FOUND IN PORCINE SECRETORY ENAMEL IN-VITRO [J].
TANABE, T ;
FUKAE, M ;
SHIMIZU, M .
ARCHIVES OF ORAL BIOLOGY, 1994, 39 (04) :277-281
[74]  
TERMINE JD, 1980, J BIOL CHEM, V255, P9760
[75]   Evolution of nicotinic acetylcholine receptor subunits [J].
Tsunoyama, K ;
Gojobori, T .
MOLECULAR BIOLOGY AND EVOLUTION, 1998, 15 (05) :518-527
[76]   IMMUNOCHEMICAL AND IMMUNOHISTOCHEMICAL STUDIES, USING ANTISERA AGAINST PORCINE 25KDA AMELOGENIN, 89KDA ENAMELIN AND THE 13-17KDA NONAMELOGENINS, ON IMMATURE ENAMEL OF THE PIG AND RAT [J].
UCHIDA, T ;
TANABE, T ;
FUKAE, M ;
SHIMIZU, M ;
YAMADA, M ;
MIAKE, K ;
KOBAYASHI, S .
HISTOCHEMISTRY, 1991, 96 (02) :129-138
[77]   IMMUNOCYTOCHEMICAL AND IMMUNOCHEMICAL DETECTION OF A 32 KDA NONAMELOGENIN AND RELATED PROTEINS IN PORCINE TOOTH GERMS [J].
UCHIDA, T ;
TANABE, T ;
FUKAE, M ;
SHIMIZU, M .
ARCHIVES OF HISTOLOGY AND CYTOLOGY, 1991, 54 (05) :527-538
[78]   The platypus is in its place: Nuclear genes and indels confirm the sister group relation of monotremes and therians [J].
van Rheede, T ;
Bastiaans, T ;
Boone, DN ;
Hedges, SB ;
de Jong, WW ;
Madsen, O .
MOLECULAR BIOLOGY AND EVOLUTION, 2006, 23 (03) :587-597
[79]   SIGNAL SEQUENCES - THE LIMITS OF VARIATION [J].
VONHEIJNE, G .
JOURNAL OF MOLECULAR BIOLOGY, 1985, 184 (01) :99-105
[80]   Genome analysis of the platypus reveals unique signatures of evolution [J].
Warren, Wesley C. ;
Hillier, LaDeana W. ;
Graves, Jennifer A. Marshall ;
Birney, Ewan ;
Ponting, Chris P. ;
Grutzner, Frank ;
Belov, Katherine ;
Miller, Webb ;
Clarke, Laura ;
Chinwalla, Asif T. ;
Yang, Shiaw-Pyng ;
Heger, Andreas ;
Locke, Devin P. ;
Miethke, Pat ;
Waters, Paul D. ;
Veyrunes, Frederic ;
Fulton, Lucinda ;
Fulton, Bob ;
Graves, Tina ;
Wallis, John ;
Puente, Xose S. ;
Lopez-Otin, Carlos ;
Ordonez, Gonzalo R. ;
Eichler, Evan E. ;
Chen, Lin ;
Cheng, Ze ;
Deakin, Janine E. ;
Alsop, Amber ;
Thompson, Katherine ;
Kirby, Patrick ;
Papenfuss, Anthony T. ;
Wakefield, Matthew J. ;
Olender, Tsviya ;
Lancet, Doron ;
Huttley, Gavin A. ;
Smit, Arian F. A. ;
Pask, Andrew ;
Temple-Smith, Peter ;
Batzer, Mark A. ;
Walker, Jerilyn A. ;
Konkel, Miriam K. ;
Harris, Robert S. ;
Whittington, Camilla M. ;
Wong, Emily S. W. ;
Gemmell, Neil J. ;
Buschiazzo, Emmanuel ;
Jentzsch, Iris M. Vargas ;
Merkel, Angelika ;
Schmitz, Juergen ;
Zemann, Anja .
NATURE, 2008, 453 (7192) :175-U1