Solid-phase synthesis of branched RNA and branched DNA/RNA chimeras

被引:27
作者
Grotli, M [1 ]
Eritja, R [1 ]
Sproat, B [1 ]
机构
[1] INNOVIR, D-37124 ROSDORF, GERMANY
关键词
D O I
10.1016/S0040-4020(97)00731-X
中图分类号
O62 [有机化学];
学科分类号
070303 ; 081704 ;
摘要
An effective method for synthesising branched oligonucleotides on solid phase in the 5' to 3' direction has been developed. Special branch-point monomers enable the synthesis of branched oligonucleotides which can have sequences of different length and base composition attached to the 2'-and 3'-hydroxyl groups of the branch point ribonucleoside. The branched oligonucleotides are assembled on commercial DNA synthesisers, the crude products are readily purified by reversed phase HPLC and the fully deprotected products are conveniently analysed by mass spectrometry. (C) 1997 Elsevier Science Ltd.
引用
收藏
页码:11317 / 11346
页数:30
相关论文
共 41 条
[1]  
ANDRUS A, 1986, P AM CHEM SOC M ORG
[2]   THE SYNTHESIS OF SPECIFIC RIBONUCLEOTIDES AND UNRELATED PHOSPHORYLATED BIOMOLECULES BY THE PHOSPHORAMIDITE METHOD [J].
BEAUCAGE, SL ;
IYER, RP .
TETRAHEDRON, 1993, 49 (46) :10441-10488
[3]   SYNTHESIS AND APPLICATIONS OF OLIGORIBONUCLEOTIDES WITH SELECTED 2'-O-METHYLATION USING THE 2'-O-[1-(2-FLUOROPHENYL)-4-METHOXYPIPERIDIN-4-YL] PROTECTING GROUP [J].
BEIJER, B ;
SULSTON, I ;
SPROAT, BS ;
RIDER, P ;
LAMOND, AI ;
NEUNER, P .
NUCLEIC ACIDS RESEARCH, 1990, 18 (17) :5143-5151
[4]   A NEW BASE-STABLE LINKER FOR SOLID-PHASE OLIGONUCLEOTIDE SYNTHESIS [J].
BROWN, T ;
PRITCHARD, CE ;
TURNER, G ;
SALISBURY, SA .
JOURNAL OF THE CHEMICAL SOCIETY-CHEMICAL COMMUNICATIONS, 1989, (14) :891-893
[5]   USE OF THE 1-(2-FLUOROPHENYL)-4-METHOXYPIPERIDIN-4-YL (FPMP) AND RELATED PROTECTING GROUPS IN OLIGORIBONUCLEOTIDE SYNTHESIS - STABILITY OF INTERNUCLEOTIDE LINKAGES TO AQUEOUS ACID [J].
CAPALDI, DC ;
REESE, CB .
NUCLEIC ACIDS RESEARCH, 1994, 22 (12) :2209-2216
[6]   9-PHENYLXANTHEN-9-YL PROTECTING GROUP [J].
CHATTOPADHYAYA, JB ;
REESE, CB .
JOURNAL OF THE CHEMICAL SOCIETY-CHEMICAL COMMUNICATIONS, 1978, (15) :639-640
[7]   SOLID-PHASE SYNTHESIS OF BRANCHED OLIGORIBONUCLEOTIDES RELATED TO MESSENGER-RNA SPLICING INTERMEDIATES [J].
DAMHA, MJ ;
GANESHAN, K ;
HUDSON, RHE ;
ZABARYLO, SV .
NUCLEIC ACIDS RESEARCH, 1992, 20 (24) :6565-6573
[8]   A SYNTHETIC PROCEDURE FOR THE PREPARATION OF OLIGONUCLEOTIDES WITHOUT USING AMMONIA AND ITS APPLICATION FOR THE SYNTHESIS OF OLIGONUCLEOTIDES CONTAINING O-4-ALKYL THYMIDINES [J].
ERITJA, R ;
ROBLES, J ;
AVINO, A ;
ALBERICIO, F ;
PEDROSO, E .
TETRAHEDRON, 1992, 48 (20) :4171-4182
[9]   NOVEL APPROACHES TO THE SYNTHESIS AND ANALYSIS OF BRANCHED RNA [J].
GANESHAN, K ;
TADEY, T ;
NAM, K ;
BRAICH, R ;
PURDY, WC ;
BOEKE, JD ;
DAMHA, MJ .
NUCLEOSIDES & NUCLEOTIDES, 1995, 14 (3-5) :1009-1013
[10]   METHYLATION OF THYMINE RESIDUES DURING OLIGONUCLEOTIDE SYNTHESIS [J].
GAO, X ;
GAFFNEY, BL ;
SENIOR, M ;
RIDDLE, RR ;
JONES, RA .
NUCLEIC ACIDS RESEARCH, 1985, 13 (02) :573-584