m6A RNA methylation: from mechanisms to therapeutic potential

被引:642
作者
He, P. Cody [1 ,2 ,3 ]
He, Chuan [1 ,2 ,3 ]
机构
[1] Univ Chicago, Dept Biochem & Mol Biol, Dept Chem, Inst Biophys Dynam, 920 E 58Th St, Chicago, IL 60637 USA
[2] Univ Chicago, Comm Immunol, Chicago, IL 60637 USA
[3] Univ Chicago, Howard Hughes Med Inst, 5841 S Maryland Ave, Chicago, IL 60637 USA
基金
美国国家卫生研究院;
关键词
epitranscriptome; gene expression; m(6)A methylation; mRNA; RNA modifications;
D O I
10.15252/embj.2020105977
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
070307 [化学生物学]; 071010 [生物化学与分子生物学];
摘要
RNA carries a diverse array of chemical modifications that play important roles in the regulation of gene expression. N-6-methyladenosine (m(6)A), installed onto mRNA by the METTL3/METTL14 methyltransferase complex, is the most prevalent mRNA modification. m(6)A methylation regulates gene expression by influencing numerous aspects of mRNA metabolism, including pre-mRNA processing, nuclear export, decay, and translation. The importance of m(6)A methylation as a mode of post-transcriptional gene expression regulation is evident in the crucial roles m(6)A-mediated gene regulation plays in numerous physiological and pathophysiological processes. Here, we review current knowledge on the mechanisms by which m(6)A exerts its functions and discuss recent advances that underscore the multifaceted role of m(6)A in the regulation of gene expression. We highlight advances in our understanding of the regulation of m(6)A deposition on mRNA and its context-dependent effects on mRNA decay and translation, the role of m(6)A methylation of non-coding chromosomal-associated RNA species in regulating transcription, and the activities of the RNA demethylase FTO on diverse substrates. We also discuss emerging evidence for the therapeutic potential of targeting m(6)A regulators in disease.
引用
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页数:15
相关论文
共 157 条
[91]
m6A RNA methylation promotes XIST-mediated transcriptional repression [J].
Patil, Deepak P. ;
Chen, Chun-Kan ;
Pickering, Brian F. ;
Chow, Amy ;
Jackson, Constanza ;
Guttman, Mitchell ;
Jaffrey, Samie R. .
NATURE, 2016, 537 (7620) :369-+
[92]
The U6 snRNA m6A Methyltransferase METTL16 Regulates SAM Synthetase Intron Retention [J].
Pendleton, Kathryn E. ;
Chen, Beibei ;
Liu, Kuanqing ;
Hunter, Olga V. ;
Xie, Yang ;
Tu, Benjamin P. ;
Conrad, Nicholas K. .
CELL, 2017, 169 (05) :824-+
[93]
METHYLATED CONSTITUENTS OF L CELL MESSENGER-RNA - EVIDENCE FOR AN UNUSUAL CLUSTER AT 5' TERMINUS [J].
PERRY, RP ;
KELLEY, DE ;
FRIDERICI, K ;
ROTTMAN, F .
CELL, 1975, 4 (04) :387-394
[94]
Mammalian WTAP is a regulatory subunit of the RNA N6-methyladenosine methyltransferase [J].
Ping, Xiao-Li ;
Sun, Bao-Fa ;
Wang, Lu ;
Xiao, Wen ;
Yang, Xin ;
Wang, Wen-Jia ;
Adhikari, Samir ;
Shi, Yue ;
Lv, Ying ;
Chen, Yu-Sheng ;
Zhao, Xu ;
Li, Ang ;
Yang, Ying ;
Dahal, Ujwal ;
Lou, Xiao-Min ;
Liu, Xi ;
Huang, Jun ;
Yuan, Wei-Ping ;
Zhu, Xiao-Fan ;
Cheng, Tao ;
Zhao, Yong-Liang ;
Wang, Xinquan ;
Danielsen, Jannie M. Rendtlew ;
Liu, Feng ;
Yang, Yun-Gui .
CELL RESEARCH, 2014, 24 (02) :177-189
[95]
Qian S-B., 2019, NAT COMMUN, V10, P1
[96]
An Abundance of Ubiquitously Expressed Genes Revealed by Tissue Transcriptome Sequence Data [J].
Ramskold, Daniel ;
Wang, Eric T. ;
Burge, Christopher B. ;
Sandberg, Rickard .
PLOS COMPUTATIONAL BIOLOGY, 2009, 5 (12)
[97]
Targeted m6A Reader Proteins To Study Epitranscriptomic Regulation of Single RNAs [J].
Rauch, Simone ;
He, Chuan ;
Dickinson, Bryan C. .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2018, 140 (38) :11974-11981
[98]
m6A enhances the phase separation potential of mRNA [J].
Ries, Ryan J. ;
Zaccara, Sara ;
Klein, Pierre ;
Olarerin-George, Anthony ;
Namkoong, Sim ;
Pickering, Brian F. ;
Patil, Deepak P. ;
Kwak, Hojoong ;
Lee, Jun Hee ;
Jaffrey, Samie R. .
NATURE, 2019, 571 (7765) :424-+
[99]
Structure and Thermodynamics of N6-Methyladenosine in RNA: A Spring-Loaded Base Modification [J].
Roost, Caroline ;
Lynch, Stephen R. ;
Batista, Pedro J. ;
Qu, Kun ;
Chang, Howard Y. ;
Kool, Eric T. .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2015, 137 (05) :2107-2115
[100]
YTHDC1 mediates nuclear export of N6 - methyladenosine methylated mRNAs [J].
Roundtree, Ian A. ;
Luo, Guan-Zheng ;
Zhang, Zijie ;
Wang, Xiao ;
Zhou, Tao ;
Cui, Yiquang ;
Sha, Jiahao ;
Huang, Xingxu ;
Guerrero, Laura ;
Xie, Phil ;
He, Emily ;
Shen, Bin ;
He, Chuan .
ELIFE, 2017, 6