DNA methylation analysis: a review of current methodologies

被引:69
作者
Oakeley, EJ [1 ]
机构
[1] Univ Exeter, Dept Biol Sci, Hatherly Labs, Exeter EX4 4PS, Devon, England
关键词
sodium bisulphite; sodium bisulfite; HPLC; TLC; immunohistochemistry;
D O I
10.1016/S0163-7258(99)00043-1
中图分类号
R9 [药学];
学科分类号
1007 ;
摘要
The relationship between levels of DNA methylation and gene activity has been known for some time. Many of the early procedures developed gave only somewhat limited information about methylation patterns, for example, the total level of 5-methyl cytosine in the genome or the:frequency of methylation of cytosines within certain restriction sites. However, in the last few years, there has been an explosion of interest in DNA methylation, and with it, many new and powerful techniques have been developed to facilitate its study. In this paper, the key techniques currently available are reviewed and the advantages, disadvantages, and potential artifacts of each are discussed. (C) 1999 Elsevier Science Inc, All rights reserved.
引用
收藏
页码:389 / 400
页数:12
相关论文
共 55 条
[1]   HOST SPECIFICITY OF DNA PRODUCED BY ESCHERICHIA-COLI .1. HOST CONTROLLED MODIFICATION OF BACTERIOPHAGE LAMBDA [J].
ARBER, W ;
DUSSOIX, D .
JOURNAL OF MOLECULAR BIOLOGY, 1962, 5 (01) :18-+
[2]   CYTOSINE METHYLATION - THE PROS AND CONS OF DNA METHYLATION [J].
BESTOR, TH ;
COXON, A .
CURRENT BIOLOGY, 1993, 3 (06) :384-386
[3]   DNA METHYLTRANSFERASES [J].
BESTOR, TH ;
VERDINE, GL .
CURRENT OPINION IN CELL BIOLOGY, 1994, 6 (03) :380-389
[4]   DIFFERENTIATION OF 2 MOUSE-CELL LINES IS ASSOCIATED WITH HYPOMETHYLATION OF THEIR GENOMES [J].
BESTOR, TH ;
HELLEWELL, SB ;
INGRAM, VM .
MOLECULAR AND CELLULAR BIOLOGY, 1984, 4 (09) :1800-1806
[5]   A mammalian protein with specific demethylase activity for mCpG DNA [J].
Bhattacharya, SK ;
Ramchandani, S ;
Cervoni, N ;
Szyf, M .
NATURE, 1999, 397 (6720) :579-583
[6]   BIOLOGY OF DNA RESTRICTION [J].
BICKLE, TA ;
KRUGER, DH .
MICROBIOLOGICAL REVIEWS, 1993, 57 (02) :434-450
[7]   Structure and DNA methylation pattern of partially heterochromatinised endosperm nuclei in Gagea lutea (Liliaceae) [J].
Bu J. ;
Ebert I. ;
Ruffini-Castiglione M. ;
Široký J. ;
Vyskot B. ;
Greilhuber J. .
Planta, 1998, 204 (4) :506-514
[8]   S-adenosylmethionine and methylation [J].
Chiang, PK ;
Gordon, RK ;
Tal, J ;
Zeng, GC ;
Doctor, BP ;
Pardhasaradhi, K ;
McCann, PP .
FASEB JOURNAL, 1996, 10 (04) :471-480
[9]   SEPARATION OF MAJOR AND MINOR DEOXYRIBONUCLEOSIDE MONOPHOSPHATES BY REVERSE-PHASE HIGH-PERFORMANCE LIQUID-CHROMATOGRAPHY - A SIMPLE METHOD APPLICABLE TO QUANTITATION OF METHYLATED NUCLEOTIDES IN DNA [J].
CHRISTMAN, JK .
ANALYTICAL BIOCHEMISTRY, 1982, 119 (01) :38-48
[10]  
CLARK SJ, 1994, NUCLEIC ACIDS RES, V22, P2990, DOI 10.1093/nar/22.15.2990