DNA methylation analysis: a review of current methodologies

被引:69
作者
Oakeley, EJ [1 ]
机构
[1] Univ Exeter, Dept Biol Sci, Hatherly Labs, Exeter EX4 4PS, Devon, England
关键词
sodium bisulphite; sodium bisulfite; HPLC; TLC; immunohistochemistry;
D O I
10.1016/S0163-7258(99)00043-1
中图分类号
R9 [药学];
学科分类号
1007 ;
摘要
The relationship between levels of DNA methylation and gene activity has been known for some time. Many of the early procedures developed gave only somewhat limited information about methylation patterns, for example, the total level of 5-methyl cytosine in the genome or the:frequency of methylation of cytosines within certain restriction sites. However, in the last few years, there has been an explosion of interest in DNA methylation, and with it, many new and powerful techniques have been developed to facilitate its study. In this paper, the key techniques currently available are reviewed and the advantages, disadvantages, and potential artifacts of each are discussed. (C) 1999 Elsevier Science Inc, All rights reserved.
引用
收藏
页码:389 / 400
页数:12
相关论文
共 55 条
[51]   A SINGLE RESIDUE IN DNA-POLYMERASES OF THE ESCHERICHIA-COLI DNA-POLYMERASE-I FAMILY IS CRITICAL FOR DISTINGUISHING BETWEEN DEOXYRIBONUCLEOTIDES AND DIDEOXYRIBONUCLEOTIDES [J].
TABOR, S ;
RICHARDSON, CC .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1995, 92 (14) :6339-6343
[52]   COMPARISON OF BISULFITE MODIFICATION OF 5-METHYLDEOXYCYTIDINE AND DEOXYCYTIDINE RESIDUES [J].
WANG, RYH ;
GEHRKE, CW ;
EHRLICH, M .
NUCLEIC ACIDS RESEARCH, 1980, 8 (20) :4777-4790
[53]   DNA demethylation in vitro: Involvement of RNA [J].
Weiss, A ;
Keshet, I ;
Razin, A ;
Cedar, H .
CELL, 1996, 86 (05) :709-718
[54]   EXPRESSION OF AN EXOGENOUS EUKARYOTIC DNA METHYLTRANSFERASE GENE INDUCES TRANSFORMATION OF NIH-3T3 CELLS [J].
WU, JJ ;
ISSA, JP ;
HERMAN, J ;
BASSETT, DE ;
NELKIN, BD ;
BAYLIN, SB .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1993, 90 (19) :8891-8895
[55]   COBRA: A sensitive and quantitative DNA methylation assay [J].
Xiong, ZG ;
Laird, PW .
NUCLEIC ACIDS RESEARCH, 1997, 25 (12) :2532-2534