A density functional study of 17O, 14N and 2H electric field gradient tensors in the real crystalline structure of α-glycine

被引:32
作者
Behzadi, Hadi [1 ]
Hadipour, Nasser L. [1 ]
Mirzaei, Mahmoud [1 ]
机构
[1] Tarbiat Modares Univ, Dept Chem, Tehran, Iran
关键词
DFT; EFG; alpha-glycine; N-H center dot center dot center dot O hydrogen bond; C-H center dot center dot center dot O hydrogen bond;
D O I
10.1016/j.bpc.2006.07.010
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
A density functional theory (DFT) study was carried out to calculate O-17, N-14 and H-2 electric field gradient (EFG) tensors in accurate neutron diffraction structures of a.-glycine at 288 and 427 K. B3LYP is the used method and 6-311+G* and 6-311++G** are the basis sets in the calculations of EFG tensors at the sites of O-17, N-14 and H-2 nuclei in the monomer and the octameric cluster of alpha-glycine at two temperatures. Quadrupole coupling constants and asymmetry parameters are the converted parameters of calculated EFG tensors to experimentally measurable ones. The calculated results of monomer and the target molecule in octameric cluster reveal that hydrogen-bonding interactions play an important role in the crystalline structure of alpha-glycine where the results of the target molecule in octameric cluster are in good agreement with the experiments. (c) 2006 Elsevier B.V. All rights reserved.
引用
收藏
页码:179 / 183
页数:5
相关论文
共 29 条
[1]   A study of hydrogen bond of imidazole and its 4-nitro derivative by ab initio and DFT calculated NQR parameters [J].
Amini, SK ;
Hadipour, NL ;
Elmi, F .
CHEMICAL PHYSICS LETTERS, 2004, 391 (1-3) :95-100
[2]   High-field chlorine NMR spectroscopy of solid organic hydrochloride salts: A sensitive probe of hydrogen bonding environment [J].
Bryce, DL ;
Gee, M ;
Wasylishen, RE .
JOURNAL OF PHYSICAL CHEMISTRY A, 2001, 105 (45) :10413-10421
[3]   First-principles studies of C-13NMR chemical shift tensors of amino acids in crystal state [J].
Chen, X ;
Zhan, CG .
JOURNAL OF MOLECULAR STRUCTURE-THEOCHEM, 2004, 682 (1-3) :73-82
[4]   A combined experimental and theoretical 17O NMR study of crystalline urea:: An example of large hydrogen-bonding effects [J].
Dong, S ;
Ida, R ;
Wu, G .
JOURNAL OF PHYSICAL CHEMISTRY A, 2000, 104 (47) :11194-11202
[5]   A study on the intermolecular hydrogen bonds of α-glycylglycine in its actual crystalline phase using ab initio calculated 14N and 2H nuclear quadrupole coupling constants [J].
Elmi, F ;
Hadipour, NL .
JOURNAL OF PHYSICAL CHEMISTRY A, 2005, 109 (08) :1729-1733
[6]  
Frisch M.J., 1998, GAUSSIAN 98
[7]   DETERMINATION OF BOND DISTANCES AND BOND ANGLES BY SOLID-STATE NUCLEAR MAGNETIC-RESONANCE - C-13 AND N-14 NMR-STUDY OF GLYCINE [J].
HABERKORN, RA ;
STARK, RE ;
VANWILLIGEN, H ;
GRIFFIN, RG .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1981, 103 (10) :2534-2539
[8]   Ab initio calculations of NQR 35Cl frequency in organo-germanium chlorides and its dependency on Ge-O distance [J].
Hadipour, NL ;
Rafiee, MA ;
Javaheri, M ;
Mousavie, MK .
CHEMICAL PHYSICS LETTERS, 2002, 356 (5-6) :445-450
[9]   Proton NMR Chemical Shift Behavior of Hydrogen-Bonded Amide Proton of Glycine-Containing Peptides and Polypeptides as Studied by ab initio MO Calculation [J].
Hori, S. ;
Yamauchi, K. ;
Kuroki, S. ;
Ando, I. .
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2002, 3 (08) :907-913
[10]   Influence of N-H•••O and C-H•••O hydrogen bonds on the 17O NMR tensors in crystalline uracil:: Computational study [J].
Ida, R ;
De Clerk, M ;
Wu, G .
JOURNAL OF PHYSICAL CHEMISTRY A, 2006, 110 (03) :1065-1071