MHC polymorphism in Caribbean African green monkeys

被引:3
作者
Aarnink, A. [1 ]
Jacquelin, B. [2 ]
Dauba, A. [1 ]
Hebrard, S. [1 ]
Moureaux, E. [3 ]
Mueller-Trutwin, M. [2 ]
Blancher, A. [1 ]
机构
[1] Univ Toulouse 3, CHU Toulouse, Fac Med Purpan, Lab Immunogenet Mol LIMT,Lab Immunol,EA 3034, F-31059 Toulouse 9, France
[2] Inst Pasteur, Unite Regulat Infect Retrovirales, Paris, France
[3] Bioprim, F-31450 Baziege, France
关键词
MHC; Polymorphism; AGM; Microsatellites; EST; DGGE sequencing; MAJOR HISTOCOMPATIBILITY COMPLEX; SIMIAN IMMUNODEFICIENCY VIRUS; NON-HUMAN PRIMATES; CYNOMOLGUS MACAQUES; MACACA-FASCICULARIS; VERVET MONKEY; GREAT APE; POPULATION; DIVERSITY; INFECTION;
D O I
10.1007/s00251-014-0770-9
中图分类号
Q3 [遗传学];
学科分类号
071007 [遗传学];
摘要
African green monkeys (AGM) are among the most widely used nonhuman primate models used in various fields of medical research. One species of AGM that originated from West Africa, Chlorocebus sabaeus, was introduced three centuries ago in the Caribbean islands. We present here a systematic study of the major histocompatibility complex (MHC) polymorphism of Caribbean AGM which is currently frequently used as an animal model. We studied 54 animals originated from Barbados (N = 25) or Saint Kitts (N = 29). The MHC polymorphism was characterized by means of 17 MHC microsatellites spread across MHC and DRB genotyping by DGGE sequencing. We defined nine frequent MHC haplotypes of which two were found in the two insular populations suggesting either past exchanges between the two populations or a common origin of the founders of the two populations. By the analysis of a previously described EST library, we characterized 38 MHC cDNA sequences (17 class I and 21 class II). In conclusion, we characterized for the first time the MHC polymorphism of Barbados and Saint Kitts AGM. We found a restricted polymorphism due to a founding effect, which is responsible for a strong bottleneck. The poorness of MHC polymorphism observed in the Caribbean AGM populations is similar to that observed in the Mauritian cynomolgus macaque population.
引用
收藏
页码:353 / 360
页数:8
相关论文
共 39 条
[1]
Positive selection in the major histocompatibility complex class III region of cynomolgus macaques (Macaca fascicularis) of the Philippines origin [J].
Aarnink, A. ;
Bonhomme, M. ;
Blancher, A. .
TISSUE ANTIGENS, 2013, 81 (01) :12-18
[2]
SPECIES-SPECIFIC DIVERSITY AMONG SIMIAN IMMUNODEFICIENCY VIRUSES FROM AFRICAN-GREEN MONKEYS [J].
ALLAN, JS ;
SHORT, M ;
TAYLOR, ME ;
SU, S ;
HIRSCH, VM ;
JOHNSON, PR ;
SHAW, GM ;
HAHN, BH .
JOURNAL OF VIROLOGY, 1991, 65 (06) :2816-2828
[3]
[Anonymous], 2005, MAMMAL SPECIES WORLD
[4]
[Anonymous], 2001, PRIMATE TAXONOMY
[5]
Vero cell platform in vaccine production: moving towards cell culture-based viral vaccines [J].
Barrett, P. Noel ;
Mundt, Wolfgang ;
Kistner, Otfried ;
Howard, M. Keith .
EXPERT REVIEW OF VACCINES, 2009, 8 (05) :607-618
[6]
Study of cynomolgus monkey (Macaca fascicularis) MhcDRB (Mafa-DRB) polymorphism in two populations [J].
Blancher, A ;
Tisseyre, P ;
Dutaur, M ;
Apoil, PA ;
Maurer, C ;
Quesniaux, V ;
Raulf, F ;
Bigaud, M ;
Abbal, M .
IMMUNOGENETICS, 2006, 58 (04) :269-282
[7]
Study of cynomolgus monkey (Macaca fascicularis) Mhc DRB gene polymorphism in four populations [J].
Blancher, Antoine ;
Aarnink, Alice ;
Tanaka, Keiko ;
Ota, Masao ;
Inoko, Hidetoshi ;
Yamanaka, Hisashi ;
Nakagawa, Hiroshi ;
Apoil, Pol-Andre ;
Shiina, Takashi .
IMMUNOGENETICS, 2012, 64 (08) :605-614
[8]
Use of Cumulative Poisson Probability Distribution as an Estimator of the Recombination Rate in an Expanding Population: Example of the Macaca fascicularis Major Histocompatibility Complex [J].
Blancher, Antoine ;
Aarnink, Alice ;
Savy, Nicolas ;
Takahata, Naoyuki .
G3-GENES GENOMES GENETICS, 2012, 2 (01) :123-130
[9]
Origin and number of founders in an introduced insular primate: estimation from nuclear genetic data [J].
Bonhomme, M. ;
Blancher, A. ;
Cuartero, S. ;
Chikhi, L. ;
Crouau-Roy, B. .
MOLECULAR ECOLOGY, 2008, 17 (04) :1009-1019
[10]
Multiplexed microsatellites for rapid identification and characterization of individuals and populations of cercopithecidae [J].
Bonhomme, M ;
Blancher, A ;
Crouau-Roy, B .
AMERICAN JOURNAL OF PRIMATOLOGY, 2005, 67 (03) :385-391