Niabella aurantiaca gen. nov., sp nov., isolated from a greenhouse soil in Korea

被引:46
作者
Kim, Byung-Yong
Weon, Hang-Yeon
Yoo, Seung-Hee
Hong, Seung-Beom
Kwon, Soon-Wo [1 ]
Stackebrandt, Erko
Go, Seung-Joo
机构
[1] KACC, Microbial Genet Div, Nat Inst Agr Biotechnol, Rural Dev Adm, Suwon 441707, South Korea
[2] Natl Inst Agr Sci & Technol, Div Appl Microbiol, Rural Dev Adm, Suwon 441707, South Korea
[3] Deutsch Sammlung Mikroorganismen & Zellkulturen G, D-38124 Braunschweig, Germany
关键词
D O I
10.1099/ijs.0.64614-0
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
An orange-coloured bacterial strain, designated R2A15-11(T), was isolated from greenhouse soil. The strain was found to be strictly aerobic, Gram-negative, non-spore-forming and non-flagellated. The cells were short rods (0.7-0.9 x 1.0-1.5 mu m) and produced flexirubin. Growth of the strain was observed at 10-35 degrees C, pH 5.0-8.0 and 0-3% (w/v) NaCl. The predominant isoprenoid quinone was MK-7. The major fatty acids were iSO-C-15:0, iso-C-15:1 G, iSO-C-17:0 3-OH and slimmed feature 3 (comprising iso-C-15:0 2-OH and/or C(16:1)w7c). The genomic DNA G + C content was 45.0 mol%. Phylogenetic analysis of the 16S rRNA gene sequence of strain R2A15-11(T) revealed a clear affiliation with the phylum Bacteroidetes, and the highest levels of sequence similarity were found with respect to Terrimonas ferruginea ATCC 13524(T) (91.5%), Terrimonas lutea DYT (90.2 %), Niastella yeongjuensis GR20-13(T) (89.9%) and Niastella koreensis GR20-10(T) (89.7 %). On the basis of the polyphasic evidence from this study, strain R2A15-11(T) represents a novel genus and species, for which the name Niabella aurantiaca gen. nov., sp. nov. is proposed. The type strain of Niabella aurantiaca is R2A15-11(T) (=KACC 11698(T) =DSM 17617(T)).
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页码:538 / 541
页数:4
相关论文
共 14 条
[1]   Agrococcus jenensis gen nov, sp nov, a new genus of actinomycetes with diaminobutyric acid in the cell wall [J].
Groth, I ;
Schumann, P ;
Weiss, N ;
Martin, K ;
Rainey, FA .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1996, 46 (01) :234-239
[2]   MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment [J].
Kumar, S ;
Tamura, K ;
Nei, M .
BRIEFINGS IN BIOINFORMATICS, 2004, 5 (02) :150-163
[3]   Pseudomonas koreensis sp nov., Pseudomonas umsongensis sp nov and Pseudomonas jinjuensis sp nov., novel species from farm soils in Korea [J].
Kwon, SW ;
Kim, JS ;
Park, IC ;
Yoon, SH ;
Park, DH ;
Lim, CK ;
Go, SJ .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2003, 53 :21-27
[4]   In situ identification of polyphosphate- and polyhydroxyalkanoate-accumulating traits for microbial populations in a biological phosphorus removal process [J].
Liu, WT ;
Nielsen, AT ;
Wu, JH ;
Tsai, CS ;
Matsuo, Y ;
Molin, S .
ENVIRONMENTAL MICROBIOLOGY, 2001, 3 (02) :110-122
[5]   PRECISE MEASUREMENT OF THE G+C CONTENT OF DEOXYRIBONUCLEIC-ACID BY HIGH-PERFORMANCE LIQUID-CHROMATOGRAPHY [J].
MESBAH, M ;
PREMACHANDRAN, U ;
WHITMAN, WB .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1989, 39 (02) :159-167
[6]   Phylogenetic structure of the genera Flexibacter, Flexithrix, and Microscilla deduced from 16S rRNA sequence analysis [J].
Nakagawa, Y ;
Sakane, T ;
Suzuki, M ;
Hatano, K .
JOURNAL OF GENERAL AND APPLIED MICROBIOLOGY, 2002, 48 (03) :155-165
[7]   PHYLOGENETIC DIVERSITY OF THE GENUS CYTOPHAGA REVEALED BY 16S RIBOSOMAL-RNA SEQUENCING AND MENAQUINONE ANALYSIS [J].
NAKAGAWA, Y ;
YAMASATO, K .
JOURNAL OF GENERAL MICROBIOLOGY, 1993, 139 :1155-1161
[8]  
Reichenbach H, 1992, The Prokaryotes: a Handbook on the Biology of Bacteria: Ecophysiology, Isolation, Identification, Applications, P3631, DOI DOI 10.1007/978-1-4757-2191-1_37
[9]  
Sasser M, 1990, USFCC NEWS LETT, V20, P1
[10]   Phylogenetic position of Chitinophaga pinensis in the Flexibacter-Bacteroides-Cytophaga phylum [J].
Sly, LI ;
Taghavi, M ;
Fegan, M .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1999, 49 :479-481