Mass spectral analysis in proteomics

被引:210
作者
Yates, JR [1 ]
机构
[1] Scripps Res Inst, Dept Cell Biol, La Jolla, CA 92037 USA
来源
ANNUAL REVIEW OF BIOPHYSICS AND BIOMOLECULAR STRUCTURE | 2004年 / 33卷
关键词
MALDI; ESI; tandem mass spectrometry; multidimensional separations;
D O I
10.1146/annurev.biophys.33.111502.082538
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Mass spectrometry provides key tools for the analysis of proteins. New types of mass spectrometers that provide enhanced capability to discover protein identities and perform improved proteomic experiments are discussed. Handling the complex mixtures of peptides and proteins generated from protein complexes and whole cells requires multidimensional separations; several forms of separation are discussed. Applications of mass spectrometry-based approaches for contemporary proteomic analyses are described.
引用
收藏
页码:297 / 316
页数:20
相关论文
共 92 条
[51]   Informatics and multiplexing of intact protein identification in bacteria and the archaea [J].
Meng, FY ;
Cargile, BJ ;
Miller, LM ;
Forbes, AJ ;
Johnson, JR ;
Kelleher, NL .
NATURE BIOTECHNOLOGY, 2001, 19 (10) :952-957
[52]   Processing complex mixtures of intact proteins for direct analysis by mass spectrometry [J].
Meng, FY ;
Cargile, BJ ;
Patrie, SM ;
Johnson, JR ;
McLoughlin, SM ;
Kelleher, NL .
ANALYTICAL CHEMISTRY, 2002, 74 (13) :2923-2929
[53]   Sequence tag identification of intact proteins by matching tandem mass spectral data against sequence data bases [J].
Mortz, E ;
OConnor, PB ;
Roepstorff, P ;
Kelleher, NL ;
Wood, TD ;
McLafferty, FW ;
Mann, M .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1996, 93 (16) :8264-8267
[54]   Two-dimensional SEC/RPLC coupled to mass spectrometry for the analysis of peptides [J].
Opiteck, GJ ;
Jorgenson, JW ;
Anderegg, RJ .
ANALYTICAL CHEMISTRY, 1997, 69 (13) :2283-2291
[55]   High throughput proteome-wide precision measurements of protein expression using mass spectrometry [J].
Pasa-Tolic, L ;
Jensen, PK ;
Anderson, GA ;
Lipton, MS ;
Peden, KK ;
Martinovic, S ;
Tolic, N ;
Bruce, JE ;
Smith, RD .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1999, 121 (34) :7949-7950
[56]   Evaluation of multidimensional chromatography coupled with tandem mass spectrometry (LC/LC-MS/MS) for large-scale protein analysis: The yeast proteome [J].
Peng, JM ;
Elias, JE ;
Thoreen, CC ;
Licklider, LJ ;
Gygi, SP .
JOURNAL OF PROTEOME RESEARCH, 2003, 2 (01) :43-50
[57]  
Perkins DN, 1999, ELECTROPHORESIS, V20, P3551, DOI 10.1002/(SICI)1522-2683(19991201)20:18<3551::AID-ELPS3551>3.0.CO
[58]  
2-2
[59]  
Petricoin EF, 2002, J NATL CANCER I, V94, P1576
[60]   Use of proteomic patterns in serum to identify ovarian cancer [J].
Petricoin, EF ;
Ardekani, AM ;
Hitt, BA ;
Levine, PJ ;
Fusaro, VA ;
Steinberg, SM ;
Mills, GB ;
Simone, C ;
Fishman, DA ;
Kohn, EC ;
Liotta, LA .
LANCET, 2002, 359 (9306) :572-577