Classification of malignant gliomas by infrared spectroscopy and linear discriminant analysis

被引:57
作者
Krafft, Christoph [1 ]
Thuemmler, Katja
Sobottka, Stephan B.
Schackert, Gabriele
Salzer, Reiner
机构
[1] Tech Univ Dresden, Inst Analyt Chem, D-01062 Dresden, Germany
[2] Tech Univ Dresden, Clin Neurosurg, D-01307 Dresden, Germany
关键词
infrared spectroscopy; multivariate classification; brain tumors;
D O I
10.1002/bip.20492
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Gliomas are the most frequent primary brain tumors. Their malignancies are graded from 1 to 4. Malignant gliomas are astrocytoma grade 3 and glioblastoma grade 4. An IR spectroscopic approach is presented to diagnose brain tissue at the molecular level probing chemical and structural properties without external markers. IR spectroscopic maps were recorded in transmission mode by sequential acquisition of IR spectra. Training spectra of various tissue types are selected from IR spectroscopic maps in accordance with histological assessment of hematoxylin and eosin stained parallel tissue sections. A decrease of the lipid-to-protein ratio in IR spectra is correlated with the malignancy of gliomas. This chemical property is described by the band intensity ratio 2850 to 1655 cm(-1). Two additional molecular descriptors are identified at 1545 cm(-1)/1655 cm(-1) and (1231 + 1450) cm(-1)/1655 cm(-1), which are associated with hemoglobin and collagen, respectively. This metric is used to train a classification model based on linear discriminant analysis. The model is applied to classify normal brain tissue, astrocytoma grade 2, astrocytoma grade 3, glioblastoma, hemorrhage, and leptomeninges in IR spectroscopic maps of cryosections from two glioma patients. As independent test samples, single IR spectra from cryosections of 51 patients are subjected to the classification model. Normal brain tissue is assigned with 100% accuracy; malignant gliomas are assigned with 93% accuracy. The high success rate demonstrates that IR spectroscopy can complement established methods such as histopathology or immunohistochemistry to characterize dried cryosections. (c) 2006 Wiley Periodicals, Inc.
引用
收藏
页码:301 / 305
页数:5
相关论文
共 13 条
[1]   Classification of human gliomas by infrared imaging spectroscopy and chemometric image processing [J].
Beleites, C ;
Steiner, G ;
Sowa, MG ;
Baumgartner, R ;
Sobottka, S ;
Schackert, G ;
Salzer, R .
VIBRATIONAL SPECTROSCOPY, 2005, 38 (1-2) :143-149
[2]  
Campanella R, 1992, J Neurosurg Sci, V36, P11
[3]   INFRARED SPECTROSCOPIC CHARACTERIZATION OF MULTIPLE-SCLEROSIS PLAQUES IN THE HUMAN CENTRAL-NERVOUS-SYSTEM [J].
CHOO, LP ;
JACKSON, M ;
HALLIDAY, WC ;
MANTSCH, HH .
BIOCHIMICA ET BIOPHYSICA ACTA, 1993, 1182 (03) :333-337
[4]   Infrared spectroscopic imaging for histopathologic recognition [J].
Fernandez, DC ;
Bhargava, R ;
Hewitt, SM ;
Levin, IW .
NATURE BIOTECHNOLOGY, 2005, 23 (04) :469-474
[5]   BEWARE OF CONNECTIVE-TISSUE PROTEINS - ASSIGNMENT AND IMPLICATIONS OF COLLAGEN ABSORPTIONS IN INFRARED-SPECTRA OF HUMAN TISSUES [J].
JACKSON, M ;
CHOO, LP ;
WATSON, PH ;
HALLIDAY, WC ;
MANTSCH, HH .
BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR BASIS OF DISEASE, 1995, 1270 (01) :1-6
[6]  
Kleihues P., 2000, PATHOLOGY GENETICS T
[7]   Raman and infrared spectroscopic mapping of human primary intracranial tumors: a comparative study [J].
Krafft, C ;
Sobottka, SB ;
Schackert, G ;
Salzer, R .
JOURNAL OF RAMAN SPECTROSCOPY, 2006, 37 (1-3) :367-375
[8]   Analysis of human brain tissue, brain tumors and tumor cells by infrared spectroscopic mapping [J].
Krafft, C ;
Sobottka, SB ;
Gabriele, SB ;
Salzer, R .
ANALYST, 2004, 129 (10) :921-925
[9]  
Lee LS, 1998, ONCOL RES, V10, P23
[10]   NONDESTRUCTIVE ANALYSIS OF THE PROTEIN CONFORMATIONAL STRUCTURE OF HUMAN PITUITARY-ADENOMAS USING REFLECTANCE FT-IR MICROSPECTROSCOPY [J].
LEE, LS ;
LIN, SY ;
CHI, CW ;
LIU, HC ;
CHENG, CL .
CANCER LETTERS, 1995, 94 (01) :65-69