Submicroscopic deletion in patients with Williams-Beuren syndrome influences expression levels of the nonhemizygous flanking genes

被引:133
作者
Merla, Giuseppe
Howald, Cedric
Henrichsen, Charlotte N.
Lyle, Robert
Wyss, Carine
Zabot, Marie-Therese
Antonarakis, Stylianos E.
Reymond, Alexandre
机构
[1] Univ Lausanne, Ctr Integrat Gen, Lausanne, Switzerland
[2] Univ Geneva, Sch Med, Dept Genet Med & Dev, CH-1211 Geneva, Switzerland
[3] IRCCS, Gen Med Serv, San Giovanni Rotondo, Italy
[4] Hop Debrousse, Ctr Biotechnol Cellulaire, Hosp Civils Lyon, Lyon, France
[5] Interdisciplinary Grp Study ELN Gene, Lyon, France
关键词
D O I
10.1086/506371
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Genomic imbalance is a common cause of phenotypic abnormalities. We measured the relative expression level of genes that map within the microdeletion that causes Williams-Beuren syndrome and within its flanking regions. We found, unexpectedly, that not only hemizygous genes but also normal-copy neighboring genes show decreased relative levels of expression. Our results suggest that not only the aneuploid genes but also the flanking genes that map several megabases away from a genomic rearrangement should be considered possible contributors to the phenotypic variation in genomic disorders.
引用
收藏
页码:332 / 341
页数:10
相关论文
共 59 条
[21]   A duplicated gene in the breakpoint regions of the 7q11.23 Williams-Beuren syndrome deletion encodes the initiator binding protein TFII-I and BAP-135, a phosphorylation target of BTK [J].
Jurado, LAP ;
Wang, YK ;
Peoples, R ;
Coloma, A ;
Cruces, J ;
Francke, U .
HUMAN MOLECULAR GENETICS, 1998, 7 (03) :325-334
[22]   Transcript level alterations reflect gene dosage effects across multiple tissues in a mouse model of down syndrome [J].
Kahlem, P ;
Sultan, M ;
Herwig, R ;
Steinfath, M ;
Balzereit, D ;
Eppens, B ;
Saran, NG ;
Pletcher, MT ;
South, ST ;
Stetten, G ;
Lehrach, H ;
Reeves, RH ;
Yaspo, ML .
GENOME RESEARCH, 2004, 14 (07) :1258-1267
[23]   Using case study comparisons to explore genotype-phenotype correlations in Williams-Beuren syndrome [J].
Karmiloff-Smith, A ;
Grant, J ;
Ewing, S ;
Carette, MJ ;
Metcalfe, K ;
Donnai, D ;
Read, AP ;
Tassabehji, M .
JOURNAL OF MEDICAL GENETICS, 2003, 40 (02) :136-140
[24]   Regional patterns of gene expression in human and chimpanzee brains [J].
Khaitovich, P ;
Muetzel, B ;
She, XW ;
Lachmann, M ;
Hellmann, I ;
Dietzsch, J ;
Steigele, S ;
Do, HH ;
Weiss, G ;
Enard, W ;
Heissig, F ;
Arendt, T ;
Nieselt-Struwe, K ;
Eichler, EE ;
Pääbo, S .
GENOME RESEARCH, 2004, 14 (08) :1462-1473
[25]   Long-range control of gene expression: Emerging mechanisms and disruption in disease [J].
Kleinjan, DA ;
van Heyningen, V .
AMERICAN JOURNAL OF HUMAN GENETICS, 2005, 76 (01) :8-32
[26]   Genome structure and cognitive map of Williams syndrome [J].
Korenberg, JR ;
Chen, XN ;
Hirota, H ;
Lai, Z ;
Bellugi, U ;
Burian, D ;
Roe, B ;
Matsuoka, R .
JOURNAL OF COGNITIVE NEUROSCIENCE, 2000, 12 :89-107
[27]   Eucaryotic genome evolution through the spontaneous duplication of large chromosomal segments [J].
Koszul, R ;
Caburet, S ;
Dujon, B ;
Fischer, G .
EMBO JOURNAL, 2004, 23 (01) :234-243
[28]   A long-range Shh enhancer regulates expression in the developing limb and fin and is associated with preaxial polydactyly [J].
Lettice, LA ;
Heaney, SJH ;
Purdie, LA ;
Li, L ;
de Beer, P ;
Oostra, BA ;
Goode, D ;
Elgar, G ;
Hill, RE ;
de Graaff, E .
HUMAN MOLECULAR GENETICS, 2003, 12 (14) :1725-1735
[29]   Novel arterial pathology in mice and humans hemizygous for elastin [J].
Li, DY ;
Faury, G ;
Taylor, DG ;
Davis, EC ;
Boyle, WA ;
Mecham, RP ;
Stenzel, P ;
Boak, B ;
Keating, MT .
JOURNAL OF CLINICAL INVESTIGATION, 1998, 102 (10) :1783-1787
[30]   Elastin is an essential determinant of arterial morphogenesis [J].
Li, DY ;
Brooke, B ;
Davis, EC ;
Mecham, RP ;
Sorensen, LK ;
Boak, BB ;
Eichwald, E ;
Keating, MT .
NATURE, 1998, 393 (6682) :276-280