Different bindings of the minor groove ligands DAPI and Hoechst 33258 to multimers of the curved (CA(4)T(4)G) and noncurved (CT(4)A(4)G) DNA sequences

被引:13
作者
Caneva, RC
DeSimoni, A
Mayol, L
Rossetti, L
Savino, M
机构
[1] UNIV ROMA LA SAPIENZA,DIPARTIMENTO GENET & BIOL MOL,I-00185 ROME,ITALY
[2] UNIV ROMA LA SAPIENZA,IST PASTEUR,FDN CENCI BOLOGNETTI,I-00185 ROME,ITALY
[3] UNIV NAPLES,DIPARTIMENTO CHIM SOSTANZE NAT,I-80131 NAPLES,ITALY
来源
BIOCHIMICA ET BIOPHYSICA ACTA-GENE STRUCTURE AND EXPRESSION | 1997年 / 1353卷 / 02期
关键词
DNA curvature; CA(4)T(4)G; CT(4)A(4)G; minor groove; DAPI; Hoechst; 33258;
D O I
10.1016/S0167-4781(97)00091-2
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Equilibrium binding properties of DAPI and Hoechst for prototype curved (CA(4)T(4)G)(n) and straight (CT(4)A(4)G)(n) DNAs were derived from fluorescence intensity. Both decamers display a single strong binding site for each ligand. Hoechst binds seven times stronger to curved than to straight DNA. An additional cooperative, much weaker binding site is found for DAPI. (C) 1997 Elsevier Science B.V.
引用
收藏
页码:93 / 97
页数:5
相关论文
共 31 条
[1]   DNA-SEQUENCE PREFERENCES OF SEVERAL AT-SELECTIVE MINOR-GROOVE BINDING LIGANDS [J].
ABUDAYA, A ;
BROWN, PM ;
FOX, KR .
NUCLEIC ACIDS RESEARCH, 1995, 23 (17) :3385-3392
[2]   THE CURVATURE VECTOR IN NUCLEOSOMAL DNAS AND THEORETICAL PREDICTION OF NUCLEOSOME POSITIONING [J].
BOFFELLI, D ;
DESANTIS, P ;
PALLESCHI, A ;
SAVINO, M .
BIOPHYSICAL CHEMISTRY, 1991, 39 (02) :127-136
[3]  
BORDIN F, 1992, BIOCHEM INT, V27, P891
[4]   DIFFERENT SUPERSTRUCTURAL FEATURES OF THE COMPLEXES BETWEEN SPERMINE AND THE LIGHT RESPONSIVE ELEMENTS OF THE 2 PEA GENES RBCS-3A AND RBCS-3.6 - GEL-ELECTROPHORESIS AND CIRCULAR-DICHROISM STUDIES [J].
BORDIN, F ;
CACCHIONE, S ;
SAVINO, M ;
TUFILLARO, A .
BIOPHYSICAL CHEMISTRY, 1992, 44 (02) :99-112
[5]   STRUCTURAL DETAILS OF AN ADENINE TRACT THAT DOES NOT CAUSE DNA TO BEND [J].
BURKHOFF, AM ;
TULLIUS, TD .
NATURE, 1988, 331 (6155) :455-457
[6]   PERIODICAL POLYDEOXYNUCLEOTIDES AND DNA CURVATURE [J].
CACCHIONE, S ;
DESANTIS, P ;
FOTI, D ;
PALLESCHI, A ;
SAVINO, M .
BIOCHEMISTRY, 1989, 28 (22) :8706-8713
[7]   DNA minor groove accessibility in the nucleosome core deduced from specific interactions with DAPI [J].
Caneva, R ;
Rossetti, L ;
Savino, M .
BIOCHIMICA ET BIOPHYSICA ACTA-GENE STRUCTURE AND EXPRESSION, 1996, 1306 (2-3) :117-121
[8]   Designer DNA-binding drugs: The crystal structure of a meta-hydroxy analogue of Hoechst 33258 bound to d(CGCGAATTCGCG)(2) [J].
Clark, GR ;
Squire, CJ ;
Gray, EJ ;
Leupin, W ;
Neidle, S .
NUCLEIC ACIDS RESEARCH, 1996, 24 (24) :4882-4889
[9]  
CROTHERS DM, 1990, J BIOL CHEM, V265, P7093
[10]   A THEORETICAL-MODEL OF DNA CURVATURE [J].
DESANTIS, P ;
PALLESCHI, A ;
SAVINO, M ;
SCIPIONI, A .
BIOPHYSICAL CHEMISTRY, 1988, 32 (2-3) :305-317