Chryseobacterium taiwanense sp nov., isolated from soil in Taiwan

被引:37
作者
Tai, Chun-Ju
Kuo, Hsiao-Ping
Lee, Fwu-Ling
Chen, Han-Ken
Yokota, Akira
Lo, Chi-Chu
机构
[1] Bioresource Coll & Res Ctr, Food Ind Res & Dev Inst, Hsinchu 30062, Taiwan
[2] Univ Tokyo, Inst Mol & Cellular Biosci, Bunkyo Ku, Tokyo 1130032, Japan
关键词
D O I
10.1099/ijs.0.64294-0
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Among a large collection of Taiwanese soil isolates, a novel Gram-negative, rod-shaped, non-spore-forming, yellow-pigmented bacterial strain, Soil-3-27(T,) was isolated from farmland in Wu-Feng, Taiwan. The isolate was subjected to a polyphasic study including 16S rRNA gene sequencing, DNA-DNA hybridization, fatty acid analysis and comparative phenotypic characterization. The 16S rRNA gene sequence analysis indicated that the organism belongs the genus Chryseobacterium. The organism contains menaquinone MK-6 as the predominant isoprenoid quinone and 15: 0 iso (43%), 17:1 iso omega 9c (117-5%) and 17: 0 iso 3-OH (116-6%) as the major fatty acids. Phylogenetically, the closest relatives of strain Soil-3-27(T) are Chryseobacterium daecheongense, Chryseobacterium defluvii and Chryseobacterium taichungense with 96-7-97-2 % sequence similarity. DNA-DNA hybridization showed values of 8-5-24-2 % with these species. The DNA G + C content is 36(.)8 mol%. Strain Soil-3-27(T) is clearly distinguishable from other Chryseobacterium species and represents a novel species, for which the name Chryseobacterium taiwanense sp. nov. is proposed. The type strain is Soil-3-27(T) (=BCRC 17412(T) = IAM 15317(T) =LMG 23355(T)).
引用
收藏
页码:1771 / 1776
页数:6
相关论文
共 24 条
[1]  
Barrow GI., 1993, COWAN STEELS MANUAL, V3th
[2]   Chitinibacter tainanensis gen. nov., sp nov., a chitin-degrading aerobe from soil in Taiwan [J].
Chern, LL ;
Stackebrandt, E ;
Lee, SF ;
Lee, FL ;
Chen, JK ;
Fu, HM .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2004, 54 :1387-1391
[3]   A NOTE ON THE SEPARATION OF NATURAL MIXTURES OF BACTERIAL UBIQUINONES USING REVERSE-PHASE PARTITION THIN-LAYER CHROMATOGRAPHY AND HIGH-PERFORMANCE LIQUID-CHROMATOGRAPHY [J].
COLLINS, MD ;
JONES, D .
JOURNAL OF APPLIED BACTERIOLOGY, 1981, 51 (01) :129-134
[4]  
Cowan ST, 1974, COWAN STEELS MANUAL
[5]   Chryseobacterium vrystaatense sp nov., isolated from raw chicken in a chicken-processing plant [J].
de Beer, H ;
Hugo, CJ ;
Jooste, PJ ;
Willems, A ;
Vancanneyt, M ;
Coenye, T ;
Vandamme, PAR .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2005, 55 :2149-2153
[6]   FLUOROMETRIC DEOXYRIBONUCLEIC ACID DEOXYRIBONUCLEIC ACID HYBRIDIZATION IN MICRODILUTION WELLS AS AN ALTERNATIVE TO MEMBRANE-FILTER HYBRIDIZATION IN WHICH RADIOISOTOPES ARE USED TO DETERMINE GENETIC RELATEDNESS AMONG BACTERIAL STRAINS [J].
EZAKI, T ;
HASHIMOTO, Y ;
YABUUCHI, E .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1989, 39 (03) :224-229
[7]   TOWARD DEFINING COURSE OF EVOLUTION - MINIMUM CHANGE FOR A SPECIFIC TREE TOPOLOGY [J].
FITCH, WM .
SYSTEMATIC ZOOLOGY, 1971, 20 (04) :406-&
[8]  
Gerhardt P., 1981, Manual of methods for general bacteriology
[9]   FLAVOBACTERIUM-GLEUM, A NEW SPECIES FOUND IN HUMAN CLINICAL SPECIMENS [J].
HOLMES, B ;
OWEN, RJ ;
STEIGERWALT, AG ;
BRENNER, DJ .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1984, 34 (01) :21-25
[10]   Transfer of Chryseobacterium meningosepticum and Chryseobacterium miricola to Elizabethkingia gen. nov as Elizabethkingia meningoseptica comb. nov and Elizabethkingia miricola comb. nov. [J].
Kim, KK ;
Kim, MK ;
Lim, JH ;
Park, HY ;
Lee, ST .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2005, 55 :1287-1293