Directed evolution of high-affinity antibody mimics using mRNA display

被引:194
作者
Xu, LH [1 ]
Aha, P [1 ]
Gu, K [1 ]
Kuimelis, RG [1 ]
Kurz, M [1 ]
Lam, T [1 ]
Lim, AC [1 ]
Liu, HX [1 ]
Lohse, PA [1 ]
Sun, L [1 ]
Weng, S [1 ]
Wagner, RW [1 ]
Lipovsek, D [1 ]
机构
[1] Phylos Inc, Lexington, MA 02421 USA
来源
CHEMISTRY & BIOLOGY | 2002年 / 9卷 / 08期
关键词
D O I
10.1016/S1074-5521(02)00187-4
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
We constructed a library of >10(12) unique, covalently coupled mRNA-protein molecules by randomizing three exposed loops of an immunoglobulin-like protein, the tenth fibronectin type III domain ((10)Fn3). The antibody mimics that bound TNF-alpha were isolated from the library using mRNA display. Ten rounds of selection produced (10)Fn3 variants that bound TNF-alpha with dissociation constants (K-d) between 1 and 24 nM. After affinity maturation, the lowest K-d measured was 20 pM. Selected antibody mimics were shown to capture TNF-alpha when immobilized in a protein microarray. (10)Fn3-based scaffold libraries and mRNA-display allow the isolation of high-affinity, specific antigen binding proteins; potential applications of such binding proteins include diagnostic protein microarrays and protein therapeutics.
引用
收藏
页码:933 / 942
页数:10
相关论文
共 72 条
[1]   Green fluorescent protein as a scaffold for intracellular presentation of peptides [J].
Abedi, MR ;
Caponigro, G ;
Kamb, A .
NUCLEIC ACIDS RESEARCH, 1998, 26 (02) :623-630
[2]  
AKAMATSU Y, 1993, J IMMUNOL, V151, P4651
[3]   A heterodimeric coiled-coil peptide pair selected in vivo from a designed library-versus-library ensemble [J].
Arndt, KM ;
Pelletier, JN ;
Müller, KM ;
Alber, T ;
Michnick, SW ;
Plückthun, A .
JOURNAL OF MOLECULAR BIOLOGY, 2000, 295 (03) :627-639
[4]   Helix-stabilized Fv (hsFv) antibody fragments:: Substituting the constant domains of a Fab fragment for a heterodimeric coiled-coil domain [J].
Arndt, KM ;
Müller, KM ;
Plückthun, A .
JOURNAL OF MOLECULAR BIOLOGY, 2001, 312 (01) :221-228
[5]   SEMISYNTHETIC COMBINATORIAL ANTIBODY LIBRARIES - A CHEMICAL SOLUTION TO THE DIVERSITY PROBLEM [J].
BARBAS, CF ;
BAIN, JD ;
HOEKSTRA, DM ;
LERNER, RA .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1992, 89 (10) :4457-4461
[6]   Selection of RNA-binding peptides using mRNA-peptide fusions [J].
Barrick, JE ;
Takahashi, TT ;
Balakin, A ;
Roberts, RW .
METHODS, 2001, 23 (03) :287-293
[7]   Small antibody-like proteins with prescribed ligand specificities derived from the lipocalin fold [J].
Beste, G ;
Schmidt, FS ;
Stibora, T ;
Skerra, A .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1999, 96 (05) :1898-1903
[8]   PROPOSED ACQUISITION OF AN ANIMAL PROTEIN DOMAIN BY BACTERIA [J].
BORK, P ;
DOOLITTLE, RF .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1992, 89 (19) :8990-8994
[9]   Minimizing a binding domain from protein A [J].
Braisted, AC ;
Wells, JA .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1996, 93 (12) :5688-5692
[10]  
Cadwell R C, 1992, PCR Methods Appl, V2, P28, DOI 10.1101/gr.2.1.28