Structure of ribonuclease P -: a universal ribozyme

被引:59
作者
Torres-Larios, Alfredo
Swinger, Kerren K.
Pan, Tao
Mondragon, Alfonso
机构
[1] Northwestern Univ, Dept Biochem Mol Biol & Cell Biol, Evanston, IL 60208 USA
[2] Univ Chicago, Dept Biochem & Mol Biol, Chicago, IL 60637 USA
关键词
D O I
10.1016/j.sbi.2006.04.002
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Ribonuclease P (RNase P) is one of only two known universal ribozymes and was one of the first ribozymes to be discovered. It is involved in RNA processing, in particular the 5' maturation of tRNA. Unlike most other natural ribozymes, it recognizes and cleaves its substrate in trans. RNase P is a ribonucleoprotein complex containing one RNA subunit and as few as one protein subunit. It has been shown that, in bacteria and in some archaea, the RNA subunit alone can support catalysis. The structure and function of bacterial RNase P RNA have been studied extensively, but the detailed catalytic mechanism is not yet fully understood. Recently, structures of one of the structural domains and of the entire RNA component of RNase P from two different bacteria have been described. These structures provide the first atomic-level information on the structural assembly of the RNA component, and the regions involved in substrate recognition and catalysis. Comparison of these structures reveals a highly conserved core that comprises two universally conserved structural modules. Interestingly, the same structural core can be found in the context of different scaffolds.
引用
收藏
页码:327 / 335
页数:9
相关论文
共 52 条
[31]   Basis for structural diversity in homologous RNAs [J].
Krasilnikov, AS ;
Xiao, YH ;
Pan, T ;
Mondragón, A .
SCIENCE, 2004, 306 (5693) :104-107
[32]   On the occurrence of the T-loop RNA folding motif in large RNA molecules [J].
Krasilnikov, AS ;
Mondragón, A .
RNA, 2003, 9 (06) :640-643
[33]   Crystal structure of the specificity domain of ribonuclease P [J].
Krasilnikov, AS ;
Yang, XJ ;
Pan, T ;
Mondragón, A .
NATURE, 2003, 421 (6924) :760-764
[34]   Ribonuclease P: a ribonucleoprotein enzyme [J].
Kurz, JC ;
Fierke, CA .
CURRENT OPINION IN CHEMICAL BIOLOGY, 2000, 4 (05) :553-558
[35]   Geometric nomenclature and classification of RNA base pairs [J].
Leontis, NB ;
Westhof, E .
RNA, 2001, 7 (04) :499-512
[36]   Analysis of RNA motifs [J].
Leontis, NB ;
Westhof, E .
CURRENT OPINION IN STRUCTURAL BIOLOGY, 2003, 13 (03) :300-308
[37]   A specific endoribonuclease, RNase P, affects gene expression of polycistronic operon mRNAs [J].
Li, Y ;
Altman, S .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2003, 100 (23) :13213-13218
[38]   Recognition of a pre-tRNA substrate by the Bacillus subtilis RNase P holoenzyme [J].
Loria, A ;
Niranjanakumari, S ;
Fierke, CA ;
Pan, T .
BIOCHEMISTRY, 1998, 37 (44) :15466-15473
[39]  
Loria A, 1996, RNA, V2, P551
[40]   INTERACTION OF RNASE-P FROM ESCHERICHIA-COLI WITH PSEUDOKNOTTED STRUCTURES IN VIRAL RNAS [J].
MANS, RMW ;
GUERRIERTAKADA, C ;
ALTMAN, S ;
PLEIJ, CWA .
NUCLEIC ACIDS RESEARCH, 1990, 18 (12) :3479-3487