DIYA: a bacterial annotation pipeline for any genomics lab

被引：56

作者：

Stewart, Andrew C. ^{[1
]}

Osborne, Brian ^{[2
]}

Read, Timothy D. ^{[1
]}

机构：

[1] Naval Med Res Ctr, Genom Dept, Biol Def Res Directorate, Rockville, MD USA

[2] BioTeam Inc, Middleton, MA USA

来源：

BIOINFORMATICS | 2009年 / 25卷 / 07期

关键词：

SYSTEM; TECHNOLOGY; ALIGNMENT; SEQUENCE; SERVER;

D O I：

10.1093/bioinformatics/btp097

中图分类号：

Q5 [生物化学];

学科分类号：

071010 ; 081704 ;

摘要：

DIYA (Do-It-Yourself Annotator) is a modular and configurable open source pipeline software, written in Perl, used for the rapid annotation of bacterial genome sequences. The software is currently used to take DNA contigs as input, either in the form of complete genomes or the result of shotgun sequencing, and produce an annotated sequence in Genbank file format as output.

引用

页码：962 / 963

页数：2

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