Phytophthora genome sequences uncover evolutionary origins and mechanisms of pathogenesis

被引：831

作者：

Tyler, Brett M. ^{[1
]}

Tripathy, Sucheta

Zhang, Xuemin

Dehal, Paramvir

Jiang, Rays H. Y.

Aerts, Andrea

Arredondo, Felipe D.

Baxter, Laura

Bensasson, Douda

Beynon, Jim L.

Chapman, Jarrod

Damasceno, Cynthia M. B.

Dorrance, Anne E.

Dou, Daolong

Dickerman, Allan W.

Dubchak, Inna L.

Garbelotto, Matteo

Gijzen, Mark

Gordon, Stuart G.

Govers, Francine

Grunwald, Niklaus J.

Huang, Wayne

Ivors, Kelly L.

Jones, Richard W.

Kamoun, Sophien

Krampis, Konstantinos

Lamour, Kurt H.

Lee, Mi-Kyung

McDonald, W. Hayes

Medina, Monica

Meijer, Harold J. G.

Nordberg, Eric K.

Maclean, Donald J.

Ospina-Giraldo, Manuel D.

Morris, Paul F.

Phuntumart, Vipaporn

Putnam, Nicholas H.

Rash, Sam

Rose, Jocelyn K. C.

Sakihama, Yasuko

Salamov, Asaf A.

Savidor, Alon

Scheuring, Chantel F.

Smith, Brian M.

Sobral, Bruno W. S.

Terry, Astrid

Torto-Alalibo, Trudy A.

Win, Joe

Xu, Zhanyou

Zhang, Hongbin

机构：

[1] Virginia Polytech Inst & State Univ, Virginia Bioinformat Inst, Blacksburg, VA 24061 USA

[2] Dept Energy, Joint Genome Inst, Walnut Creek, CA 94598 USA

[3] Univ Calif Berkeley, Lawrence Berkeley Lab, Genom Div, Berkeley, CA 94720 USA

[4] Univ Wageningen & Res Ctr, Phytopathol Lab, NL-6709 PD Wageningen, Netherlands

[5] Hort Res Int, Warwick CV35 9EF, England

[6] Univ London Imperial Coll Sci Technol & Med, Dept Biol Sci, London SL5 7PY, England

[7] Univ Calif Berkeley, Ctr Integrat Genom, Berkeley, CA 94720 USA

[8] Cornell Univ, Dept Plant Pathol, Ithaca, NY 14853 USA

[9] Ohio State Univ, Ohio Agr Res & Dev Ctr, Dept Plant Pathol, Wooster, OH 44691 USA

[10] Univ Calif Berkeley, Dept Environm Sci Policy & Management, Ecosyst Sci Div, Berkeley, CA 94720 USA

[11] Agr & Agri Food Canada, London, ON N5V 4T3, Canada

[12] ARS, Hort Crops Res Lab, USDA, Corvallis, OR 97330 USA

[13] Lawrence Livermore Natl Lab, Biosci Directorate, Livermore, CA 94550 USA

[14] Lawrence Livermore Natl Lab, Computat Directorate, Livermore, CA 94550 USA

[15] N Carolina State Univ, Mt Hort Crops Res & Extens Ctr, Fletcher, NC 28732 USA

[16] ARS, Vegetable Lab, Henry Wallace Beltsville Agr Res Ctr, USDA, Beltsville, MD 20705 USA

[17] Univ Tennessee, Dept Entomol & Plant Pathol, Knoxville, TN 37996 USA

[18] Texas A&M Univ, Dept Soil & Crop Sci, College Stn, TX 77843 USA

[19] Oak Ridge Natl Lab, Div Chem Sci, Oak Ridge, TN 37831 USA

[20] Univ Calif, Sch Nat Sci, Merced, CA 95344 USA

[21] Univ Queensland, Dept Biochem & Mol Biol, St Lucia, Qld 4072, Australia

[22] Wilkes Univ, Dept Biol, Wilkes Barre, PA 18766 USA

[23] Bowling Green State Univ, Dept Biol Sci, Bowling Green, OH 43402 USA

[24] Cornell Univ, Dept Plant Biol, Ithaca, NY 14853 USA

[25] Hokkaido Univ, Lab Ecol Chem, Sapporo, Hokkaido 0608589, Japan

[26] Univ Calif Berkeley, Dept Integrat Biol, Berkeley, CA 94720 USA

[27] Genome Project Solut, Hercules, CA 94547 USA

来源：

SCIENCE | 2006年 / 313卷 / 5791期

基金：

英国生物技术与生命科学研究理事会;

关键词：

D O I：

10.1126/science.1128796

中图分类号：

O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];

学科分类号：

07 ; 0710 ; 09 ;

摘要：

Draft genome sequences have been determined for the soybean pathogen Phytophthora sojae and the sudden oak death pathogen Phytophthora ramorum. Oomycetes such as these Phytophthora species share the kingdom Stramenopila with photosynthetic algae such as diatoms, and the presence of many Phytophthora genes of probable phototroph origin supports a photosynthetic ancestry for the stramenopiles. Comparison of the two species' genomes reveals a rapid expansion and diversification of many protein families associated with plant infection such as hydrolases, ABC transporters, protein toxins, proteinase inhibitors, and, in particular, a superfamily of 700 proteins with similarity to known oomycete avirulence genes.

引用

页码：1261 / 1266

页数：6

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