Protein side-chain dynamics observed by solution- and solid-state NMR:: Comparative analysis of methyl 2H relaxation data

被引:50
作者
Reif, Bernd
Xue, Yi
Agarwal, Vipin
Pavlova, Maria S.
Hologne, Maggy
Diehl, Anne
Ryabov, Yaroslav E.
Skrynnikov, Nikolai R.
机构
[1] Forsch Inst Mol Pharmakol, D-13125 Berlin, Germany
[2] Purdue Univ, Dept Chem, W Lafayette, IN 47907 USA
关键词
D O I
10.1021/ja062808a
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Rapid advances in solid-state MAS NMR made it possible to probe protein dynamics on a per-residue basis, similar to solution experiments. In this work we compare methyl 2H relaxation rates measured in the solid and liquid samples of α-spectrin SH3 domain. The solution data are treated using a model-free approach to separate the contributions from the overall molecular tumbling and fast internal motion. The latter part forms the basis for comparison with the solid-state data. Although the accuracy of solid-state measurements is limited by deuterium spin diffusion, the results suggest a significant similarity between methyl dynamics in the two samples. This is a potentially important observation, preparing the ground for combined analysis of the dynamics data by solid- and solution-state NMR. Copyright © 2006 American Chemical Society.
引用
收藏
页码:12354 / 12355
页数:2
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