Investigation by NMR spectroscopy and molecular modeling of the conformations of some modified disaccharide antigens for Shigella dysenteriae type 1

被引:7
作者
Coxon, B [1 ]
Sari, N [1 ]
Mulard, LA [1 ]
Kovac, P [1 ]
Pozsgay, V [1 ]
Glaudemans, CPJ [1 ]
机构
[1] NIDDKD,MED CHEM LAB,NIH,BETHESDA,MD 20892
关键词
D O I
10.1080/07328309708006549
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The O-polysaccharide of Shigella dysenteriae type 1 is made up of multiple repeats of the linear tetrasaccharide 3)-alpha-L-Rhap-(1-->2)-alpha-D-Galp-(1-->3)-alpha-D-GlcpNAc-(1-->3)-alpha-L-Rhap-(1-->, for which the antigenic determinant for a murine monoclonal IgM antibody is the disaccharide alpha-L-Rhap-(1-->2)-alpha-D-Galp. This disaccharide and various analogs have been studied by 2D NOESY, POESY, and TOCSY NMR spectroscopy, in conjunction with proton spin-lattice relaxation rate measurements, restrained molecular mechanics, and restrained molecular dynamics with simulated annealing. It has been found that replacement of any single hydroxyl group in the determinant by a hydrogen atom, or replacement of any single hydroxyl group in the Gal residue by a fluorine atom has little if any influence on the conformation of the resulting derivatives.
引用
收藏
页码:927 / 946
页数:20
相关论文
共 35 条
[11]   PROTON SPIN-LATTICE RELAXATION RATES IN THE STRUCTURAL-ANALYSIS OF CARBOHYDRATE MOLECULES IN SOLUTION [J].
DAIS, P ;
PERLIN, AS .
ADVANCES IN CARBOHYDRATE CHEMISTRY AND BIOCHEMISTRY, 1987, 45 :125-168
[12]   SOMATIC ANTIGENS OF SHIGELLA - STRUCTURAL INVESTIGATION ON O-SPECIFIC POLYSACCHARIDE CHAIN OF SHIGELLA-DYSENTERIAE TYPE-1 LIPOPOLYSACCHARIDE [J].
DMITRIEV, BA ;
KNIREL, YA ;
KOCHETKOV, NK ;
HOFMAN, IL .
EUROPEAN JOURNAL OF BIOCHEMISTRY, 1976, 66 (03) :559-566
[13]   MOLECULAR MECHANICS MODELING OF ALPHA-(1-]2)-LINKED, ALPHA-(1-]3)-LINKED, AND ALPHA-(1-]6)-LINKED MANNOSYL DISACCHARIDES WITH MM3(92) [J].
DOWD, MK ;
FRENCH, AD ;
REILLY, PJ .
JOURNAL OF CARBOHYDRATE CHEMISTRY, 1995, 14 (4-5) :589-600
[14]   HIGH-RESOLUTION NMR STUDY OF RELAXATION MECHANISMS IN A 2-SPIN SYSTEM [J].
FREEMAN, R ;
WITTEKOEK, S ;
ERNST, RR .
JOURNAL OF CHEMICAL PHYSICS, 1970, 52 (03) :1529-+
[15]  
FRENCH AD, 1990, ACS S SERIES, V430
[16]  
French AD, 1993, J MOL STRUC-THEOCHEM, V286, P183
[17]   MAPPING OF SUBSITES OF MONOCLONAL, ANTI-CARBOHYDRATE ANTIBODIES USING DEOXY AND DEOXYFLUORO SUGARS [J].
GLAUDEMANS, CPJ .
CHEMICAL REVIEWS, 1991, 91 (01) :25-33
[18]   SPIN-LATTICE RELAXATION OF PROTONS - GENERAL, QUANTITATIVE-EVALUATION OF CONTRIBUTIONS FROM INTRAMOLECULAR DIPOLE-DIPOLE MECHANISM [J].
HALL, LD ;
HILL, HDW .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1976, 98 (05) :1269-1270
[19]   NON-SELECTIVE, PROTON SPIN-LATTICE RELAXATION RATES MEASURED AT 400 MHZ - QUANTITATIVE-DETERMINATION OF THE GEOMETRY OF DIAMAGNETIC MOLECULES IN SOLUTION [J].
HALL, LD ;
WONG, KF ;
HULL, WE ;
STEVENS, JD .
JOURNAL OF THE CHEMICAL SOCIETY-CHEMICAL COMMUNICATIONS, 1979, (21) :953-955
[20]   QUANTITATIVE-DETERMINATION OF INTERPROTON DISTANCES FOR DIAMAGNETIC MOLECULES IN SOLUTION VIA THE MEASUREMENT OF SELECTIVE PROTON SPIN-LATTICE RELAXATION RATES [J].
HALL, LD ;
WONG, KF ;
HILL, HDW .
JOURNAL OF THE CHEMICAL SOCIETY-CHEMICAL COMMUNICATIONS, 1979, (21) :951-953