Ultra-high resolution 3D NMR spectra from limited-size data sets

被引:20
作者
Chen, JH
Nietlispach, D
Shaka, AJ [1 ]
Mandelshtam, VA
机构
[1] Univ Calif Irvine, Dept Chem, Irvine, CA 92697 USA
[2] Univ Cambridge, Dept Biochem, Cambridge CB2 1GA, England
关键词
filter diagonalization; FDM2K; HNCO; triple-resonance experiments; nonlinear processing; protein assignments; resolution enhancement;
D O I
10.1016/j.jmr.2004.04.017
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
The advantage of the filter diagonalization method (FDM) for analysis of triple-resonance NMR experiments is demonstrated by application to a 3D constant time (CT) HNCO experiment. With a N-15-, C-13-labeled human ubiquitin sample (1.0mM), high spectral resolution was obtained at 500 MHz in 25 min with only 6-8 increments in each of the CT dimensions. This data set size is about a factor of 50-100 smaller than typically required, yet FDM analysis results in a fully resolved spectrum with a sharp peak for each HNCO resonance. Unlike Fourier transform (FT) processing, in which spectral resolution in each dimension is inversely proportional to the acquisition time in this dimension, FDM is a true multi-dimensional method; the resolution in all dimensions is determined by the total information content of the entire signal. As the CT dimensions of the 3D HNCO signal have approximate time-reversal symmetry, they can each be doubled by combining the usual four hyper-complex data sets. This apparent quadrupling of the data is important to the success of the method. Thus, whenever raw sensitivity is not limiting, well-resolved n-dimensional spectra can now be obtained in a small fraction of the usual time. Alternatively, to maximize sensitivity, evolution periods of faster relaxing nuclei may be radically shortened, the total required resolution being obtained through chemical shift encoding of other, more slowly relaxing, spins. Improvements similar to those illustrated with a 3D HNCO spectrum are expected for other triple-resonance spectra, where CT evolution in the indirect dimensions is implemented. (C) 2004 Elsevier Inc. All rights reserved.
引用
收藏
页码:215 / 224
页数:10
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