Solubility and Molecular Conformations of n-Alkane Chains in Water

被引:131
作者
Ferguson, Andrew L. [1 ]
Debenedetti, Pablo G. [1 ]
Panagiotopoulos, Athanassios Z. [1 ]
机构
[1] Princeton Univ, Dept Chem Engn, Princeton, NJ 08544 USA
基金
美国国家科学基金会;
关键词
MONTE-CARLO-SIMULATION; PHASE-EQUILIBRIA; HYDROPHOBIC COLLAPSE; DYNAMICS SIMULATIONS; MUTUAL SOLUBILITIES; AQUEOUS-SOLUTION; EWALD SUMMATION; BETA-HAIRPIN; HYDROCARBONS; SYSTEMS;
D O I
10.1021/jp811229q
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
We employ molecular dynamics simulations to study the solubility and molecular conformations of n-alkane chains in water. We find nearly exponential decrease in solubility with carbon number up to n-eicosane (C-20), and excellent agreement with experiment up to n-dodecane (C-12). We detect no harp break in the dependence of the solubility upon carbon number. A free energy landscape analysis of the chain conformations reveals remarkable similarities between the ideal gas and solvated phase landscapes, suggesting that solvated chain conformations are driven primarily by ideal gas statistics. We find no evidence for hydrophobic collapse of n-alkane chains shorter than n-eicosane (C-20). The primary effect of the solvent is the appearance of a barrier on the order k(B)T, not present in the ideal gas, between the free energy basins corresponding to compact and extended chain conformations, and destabilization of the most extended conformations. Our findings are robust to nontrivial modification of the potential model, suggesting that the absence of strong solvent effects on the free energy landscapes is fundamental to relatively short (<= 20-mer) chains composed of small hydrophobic monomers, and does not depend on the precise nature of the chain interactions.
引用
收藏
页码:6405 / 6414
页数:10
相关论文
共 66 条
[21]  
2-H
[22]   CANONICAL DYNAMICS - EQUILIBRIUM PHASE-SPACE DISTRIBUTIONS [J].
HOOVER, WG .
PHYSICAL REVIEW A, 1985, 31 (03) :1695-1697
[23]   Exchange Monte Carlo method and application to spin glass simulations [J].
Hukushima, K ;
Nemoto, K .
JOURNAL OF THE PHYSICAL SOCIETY OF JAPAN, 1996, 65 (06) :1604-1608
[24]   Hydrophobic effects on a molecular scale [J].
Hummer, G ;
Garde, S ;
García, AE ;
Paulaitis, ME ;
Pratt, LR .
JOURNAL OF PHYSICAL CHEMISTRY B, 1998, 102 (51) :10469-10482
[25]   VMD: Visual molecular dynamics [J].
Humphrey, W ;
Dalke, A ;
Schulten, K .
JOURNAL OF MOLECULAR GRAPHICS & MODELLING, 1996, 14 (01) :33-38
[27]   QSAR study on solubility of alkanes in water and their partition coefficients in different solvent systems using PI index [J].
Khadikar, PV ;
Mandloi, D ;
Bajaj, AV ;
Joshi, S .
BIOORGANIC & MEDICINAL CHEMISTRY LETTERS, 2003, 13 (03) :419-422
[28]   CUTOFF ERRORS IN THE EWALD SUMMATION FORMULAS FOR POINT-CHARGE SYSTEMS [J].
KOLAFA, J ;
PERRAM, JW .
MOLECULAR SIMULATION, 1992, 9 (05) :351-368
[29]   DETERMINATION OF THE CHEMICAL-POTENTIALS OF POLYMERIC SYSTEMS FROM MONTE-CARLO SIMULATIONS [J].
KUMAR, SK ;
SZLEIFER, I ;
PANAGIOTOPOULOS, AZ .
PHYSICAL REVIEW LETTERS, 1991, 66 (22) :2935-2938
[30]   Protein hydrophobic collapse and early folding steps observed in a microfluidic mixer [J].
Lapidus, Lisa J. ;
Yao, Shuhuai ;
McGarrity, Kimberly S. ;
Hertzog, David E. ;
Tubman, Emily ;
Bakajin, Olgica .
BIOPHYSICAL JOURNAL, 2007, 93 (01) :218-224