The caBIG terminology review process

被引：16

作者：

Cimino, James J. ^{[1
]}

Hayamizu, Terry F. ^{[3
]}

Bodenreider, Olivier ^{[2
]}

Davis, Brian ^{[4
]}

Stafford, Grace A. ^{[3
]}

Ringwald, Martin ^{[3
]}

机构：

[1] NIH, Lab Informat Dev, Ctr Clin, Bethesda, MD 20892 USA

[2] Natl Lib Med, Lister Hill Natl Ctr Biomed Commun, Bethesda, MD USA

[3] Jackson Lab, Bar Harbor, ME 04609 USA

[4] 3rd Millenium Inc, Waltham, MA USA

来源：

JOURNAL OF BIOMEDICAL INFORMATICS | 2009年 / 42卷 / 03期

基金：

美国国家卫生研究院;

关键词：

Terminology; Ontology; Auditing; Evaluation; LOINC;

D O I：

10.1016/j.jbi.2008.12.003

中图分类号：

TP39 [计算机的应用];

学科分类号：

080201 [机械制造及其自动化];

摘要：

The National Cancer Institute (NCI) is developing an integrated biomedical informatics infrastructure, the cancer Biomedical Informatics Grid (caBIG (R)), to support collaboration within the cancer research community. A key part of the caBIG architecture is the establishment of terminology standards for representing data. In order to evaluate the suitability of existing controlled terminologies, the caBIG Vocabulary and Data Elements Workspace (VCDE WS) working group has developed a set of criteria that serve to assess a terminology's Structure, content, documentation, and editorial process. This paper describes the evolution of these criteria and the results of their use in evaluating four standard terminologies: the Gene Ontology (GO), the NCI Thesaurus (NCIt), the Common Terminology for Adverse Events (known as CTCAE), and the laboratory portion of the Logical Objects, Identifiers, Names and Codes (LOINC). The resulting caBIG criteria are presented as a matrix that may be applicable to any terminology standardization effort. Published by Elsevier Inc.

引用

页码：571 / 580

页数：10

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