Supporting the SBML layout extension

被引:17
作者
Deckard, Anastasia [1 ]
Bergmann, Frank T. [1 ]
Sauro, Herbert M. [1 ]
机构
[1] Keck Grad Inst, Claremont, CA 91711 USA
基金
美国国家科学基金会;
关键词
D O I
10.1093/bioinformatics/btl520
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Motivation: Researchers studying large or complex biochemical networks would benefit from the ability to automatically create lucid visualizations and store them in a portable and widely accepted format. Summary: Two modules, SBMLSupportLayout and SBWAutoLayout, support reading, creating, manipulating and writing layout information for biochemical models. SBMLSupportLayout can read, update, add and render model layout information. SBWAutoLayout can automatically layout models, graphically manipulate model layout and generate layout information for models without layout information.
引用
收藏
页码:2966 / 2967
页数:2
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