A novel method for analyzing [Ca2+] flux kinetics in high-throughput screening

被引:8
作者
Gribbon, Philip
Chambers, Chris
Palo, Kaupo
Kupper, Juergen
Mueller, Juergen
Sewing, Andreas
机构
[1] Pfizer, Primary Pharmacol Grp, Sandwich CT13 9NJ, Kent, England
[2] Pfizer, HTS Ctr Emphasis, Sandwich CT13 9NJ, Kent, England
[3] Evotec Technol, Hamburg, Germany
关键词
calcium; GPCR; HTS; FLIPR;
D O I
10.1177/1087057106287929
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Driven by multiparameter fluorescence readouts and the analysis of kinetic responses from biological assay systems, the amount and complexity of high-throughput screening data are constantly increasing. As a consequence, the reduction of data to a simple number, reflecting a percentage activity/inhibition, is no longer an adequate approach because valuable additional information, for example, about compound- or process-induced artifacts, is lost. Time series data such as the transient calcium flux observed after activation of Gq-coupled G protein-coupled receptors (GPCRs), are especially challenging with respect to quantity of data; typically, responses are followed for several minutes. Based on measurements taken on the fluorometric imaging plate reader, the authors have introduced a mathematical model to describe the time traces of cellular calcium fluxes mediated by the activation of GPCRs. The model describes the time series using 13 parameters, reducing the amount of data by 90% while guiding the detection of compound-induced artifacts as well as the selection of compounds for further characterization.
引用
收藏
页码:511 / 518
页数:8
相关论文
共 12 条
[1]  
Chambers C, 2003, COMB CHEM HIGH T SCR, V6, P355
[2]   An offline-addition format for identifying GPCR modulators by screening 384-well mixed compounds in the FLIPR [J].
Gopalakrishnan, SM ;
Mammen, B ;
Schmidt, M ;
Otterstaetter, B ;
Amberg, W ;
Wernet, W ;
Kofron, JL ;
Burns, DJ ;
Warrior, U .
JOURNAL OF BIOMOLECULAR SCREENING, 2005, 10 (01) :46-55
[3]   Evaluating real-life high-throughput screening data [J].
Gribbon, P ;
Lyons, R ;
Laflin, P ;
Bradley, J ;
Chambers, C ;
Williams, BS ;
Keighley, W ;
Sewing, A .
JOURNAL OF BIOMOLECULAR SCREENING, 2005, 10 (02) :99-107
[4]   Fluorescence readouts in HTS: no gain without pain? [J].
Gribbon, P ;
Sewing, A .
DRUG DISCOVERY TODAY, 2003, 8 (22) :1035-1043
[5]   No-wash dyes for calcium flux measurement [J].
Mehlin, C ;
Crittenden, C ;
Andreyka, J .
BIOTECHNIQUES, 2003, 34 (01) :164-166
[6]   Techniques:: High-throughput measurement of intracellular Ca2+ -: back to basics [J].
Monteith, GR ;
Bird, GSJ .
TRENDS IN PHARMACOLOGICAL SCIENCES, 2005, 26 (04) :218-223
[7]   Comparative analysis of functional assays for characterization of agonist ligands at G protein-coupled receptors [J].
Niedernberg, A ;
Tunaru, S ;
Blaukat, A ;
Harris, B ;
Kostenis, E .
JOURNAL OF BIOMOLECULAR SCREENING, 2003, 8 (05) :500-510
[8]  
Schroeder K.S., 1996, J BIOMOL SCREEN, V1, P75
[9]   Identification and prediction of promiscuous aggregating inhibitors among known drugs [J].
Seidler, J ;
McGovern, SL ;
Doman, TN ;
Shoichet, BK .
JOURNAL OF MEDICINAL CHEMISTRY, 2003, 46 (21) :4477-4486
[10]   Comparison of assay technologies for a tyrosine kinase assay generates different results in high throughput screening [J].
Sills, MA ;
Weiss, D ;
Pham, Q ;
Schweitzer, R ;
Wu, X ;
Wu, JZJ .
JOURNAL OF BIOMOLECULAR SCREENING, 2002, 7 (03) :191-214