What factors affect the regioselectivity of oxidation by cytochrome P450? A DFT study of allylic hydroxylation and double bond epoxidation in a model reaction

被引:276
作者
de Visser, SP
Ogliaro, F
Sharma, PK
Shaik, S [1 ]
机构
[1] Hebrew Univ Jerusalem, Dept Organ Chem, IL-91904 Jerusalem, Israel
[2] Hebrew Univ Jerusalem, Lise Meitner Minerva Ctr Computat Quantum Chem, IL-91904 Jerusalem, Israel
关键词
D O I
10.1021/ja026872d
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Epoxidation (C=C) vis-a-vis allylic hydroxylation (C-H) reactions of propene with a model compound I (Cpd I) of the enzyme cytochrome P450 were studied using B3LYP density functional theory. Potential energy profiles and kinetic isotope effects (KIE) were calculated. The interactions in the protein pocket were mimicked by adding two external NH- - -S hydrogen bonds to the thiolate ligand and by introducing a nonpolar medium (with a dielectric constant, epsilon = 5.7) that can exert a polarization effect on the reacting species. A two-state reactivity (TSR) with high-spin (HS) and low-spin (LS) states were located for both processes (Ogliaro, F.; Harris, N.; Cohen, S.; Filatov, M.; de Visser, S. P.; Shaik, S. J Am. Chem. Soc. 2000, 122, 8977-8989. de Visser, S. P.; Ogilaro, F.; Harris, N.; Shaik, S. J. Am. Chem. Soc. 2001, 123, 3037-3047). The HS processes were found to be stepwise, whereas the LS processes were characterized as nonsynchronous but effectively concerted pathways. The computed KIE for C-H hydroxylation with and without tunneling corrections are large (>7), and they support the assignment of the corresponding transition states as hydrogen-abstraction species (Groves, J. T.; Han, Y.-Z. In Cytochrome P450: Structures, Mechanism and Biochemistry, 2nd ed.; Ortiz de Montellano, P. R., Ed.; Plenum Press: New York, 1995; Chapter 1; pp 3-48). In the gas phase, epoxidation is energetically favorable by 3.4 kcal mol(-1). Inclusion of zero-point energy reduces this difference but still predicts C=C/C-H > 1. Environmental effects were found to have major impact on the C=C/C-H ratio as well as on the stereoselectivity of the processes. Thus, two NH- - -S hydrogen bonds away from the reaction center reverse the regioselectivity and prefer hydroxylation, namely, C=C/C-H < 1. The polarity of the medium further accentuates the trend and leads to a change by 2 orders of magnitude in the regioselectivity, C=C/C-H &MLT; 1. Furthermore, since the environmental interactions prefer the LS over the HS reactions, both hydroxylation and epoxidation processes are rendered more stereoselective, again by 2 orders of magnitude. It follows, therefore, that Cpd I is a chameleon oxidant (Ogliaro, F.; Cohen, S.; de Visser, S. P.; Shaik, S. J. Am. Chem. Soc. 2000, 122, 12892-12893; Ogliaro, F.; de Visser, S. P.; Cohen, S.; Kaneti, J.; Shaik, S. Chembiochem. 2001, 2, 848-851; Ogliaro, F.; de Visser, S. P.; Groves, J. T.; Shaik, S. Angew. Chem., Int. Ed. 2001, 40, 28742878) that tunes its reactivity and selectivity patterns in response to the protein environment in which it is accommodated. A valence bond (VB) model, akin to "redox mesomerism" (Bernadou, J.; Fabiano, A.-S.; Robert, A.; Meunier, B. J. Am. Chem. Soc. 1994, 116, 9375-9376), is constructed and enables the description of a chameleon transition state. It shows that the good donor ability of the thiolate ligand and the acceptor ability of the iron porphyrin create mixed-valent situations that endow the transition state with a great sensitivity to external perturbations as in the
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页码:11809 / 11826
页数:18
相关论文
共 101 条
[31]   STEREOCHEMISTRY AND DEUTERIUM-ISOTOPE EFFECTS IN CAMPHOR HYDROXYLATION BY THE CYTOCHROME P450CAM MONOXYGENASE SYSTEM [J].
GELB, MH ;
HEIMBROOK, DC ;
MALKONEN, P ;
SLIGAR, SG .
BIOCHEMISTRY, 1982, 21 (02) :370-377
[32]   Imidazole-ligated compound I intermediates: The effects of hydrogen bonding [J].
Green, MT .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2000, 122 (39) :9495-9499
[33]   Reaction profile of the last step in cytochrome P-450 catalysis revealed by studies of model complexes [J].
Gross, Z ;
Nimri, S ;
Barzilay, CM ;
Simkhovich, L .
JOURNAL OF BIOLOGICAL INORGANIC CHEMISTRY, 1997, 2 (04) :492-506
[34]  
Groves J.T., 2000, PORPHYRIN HDB, V4, P17
[35]  
Groves John T., 1995, P3
[36]   HYDROXYLATION BY CYTOCHROME-P-450 AND METALLOPORPHYRIN MODELS - EVIDENCE FOR ALLYLIC REARRANGEMENT [J].
GROVES, JT ;
SUBRAMANIAN, DV .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1984, 106 (07) :2177-2181
[37]   ON THE MECHANISM OF OLEFIN EPOXIDATION BY OXO-IRON PORPHYRINS - DIRECT OBSERVATION OF AN INTERMEDIATE [J].
GROVES, JT ;
WATANABE, Y .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1986, 108 (03) :507-508
[38]   HYDROGEN-DEUTERIUM EXCHANGE DURING PROPYLENE EPOXIDATION BY CYTOCHROME-P-450 [J].
GROVES, JT ;
AVARIANEISSER, GE ;
FISH, KM ;
IMACHI, M ;
KUCZKOWSKI, RL .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1986, 108 (13) :3837-3838
[39]  
Groves JT, 1995, NATO ADV SCI INST SE, V459, P39
[40]   ALIPHATIC HYDROXYLATION VIA OXYGEN REBOUND - OXYGEN-TRANSFER CATALYZED BY IRON [J].
GROVES, JT ;
MCCLUSKY, GA .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1976, 98 (03) :859-861