Comparison of MS/MS methods for protein identification from 2D-PAGE

被引:5
作者
Arrigoni, Giorgio
Fernandez, Celine
Holm, Cecilia
Scigelova, Michaela
James, Peter
机构
[1] Lund Univ, Dept Prot Technol, S-22100 Lund, Sweden
[2] Univ Padua, Dept Biol Chem, I-35100 Padua, Italy
[3] Lund Univ, Dept Mol Endocrinol, S-22100 Lund, Sweden
[4] Thermo Electron, Hemel Hempstead, England
关键词
two-dimensional electrophoresis; MALDI; ESI; HPLC-MS; protein identification;
D O I
10.1021/pr0601281
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
We have compared the use of a low resolution MALDI-Ion Trap MS/MS and a high-resolution ESI-TOF-MS/MS for the analysis of spots from 2D gels. The main criteria were speed and accuracy of protein identification. The results obtained using the MALDI-MS/MS system are comparable to those from the LC-MS/MS system in terms of accuracy, but less low-level proteins are identified while the time required for the analysis is dramatically reduced.
引用
收藏
页码:2294 / 2300
页数:7
相关论文
共 8 条
[1]   ELECTROSPRAY IONIZATION FOR MASS-SPECTROMETRY OF LARGE BIOMOLECULES [J].
FENN, JB ;
MANN, M ;
MENG, CK ;
WONG, SF ;
WHITEHOUSE, CM .
SCIENCE, 1989, 246 (4926) :64-71
[2]   MATRIX-ASSISTED ULTRAVIOLET-LASER DESORPTION OF NONVOLATILE COMPOUNDS [J].
KARAS, M ;
BACHMANN, D ;
BAHR, U ;
HILLENKAMP, F .
INTERNATIONAL JOURNAL OF MASS SPECTROMETRY AND ION PROCESSES, 1987, 78 :53-68
[3]   INFLUENCE OF THE WAVELENGTH IN HIGH-IRRADIANCE ULTRAVIOLET-LASER DESORPTION MASS-SPECTROMETRY OF ORGANIC-MOLECULES [J].
KARAS, M ;
BACHMANN, D ;
HILLENKAMP, F .
ANALYTICAL CHEMISTRY, 1985, 57 (14) :2935-2939
[4]   LASER DESORPTION IONIZATION OF PROTEINS WITH MOLECULAR MASSES EXCEEDING 10000 DALTONS [J].
KARAS, M ;
HILLENKAMP, F .
ANALYTICAL CHEMISTRY, 1988, 60 (20) :2299-2301
[5]   Automated protein identification by the combination of MALDI MS and MS/MS spectra from different instruments [J].
Levander, F ;
James, P .
JOURNAL OF PROTEOME RESEARCH, 2005, 4 (01) :71-74
[6]   OF PROTONS OR PROTEINS - A BEAMS A BEAM FOR A THAT (BURNS,O.S.) [J].
MENG, CK ;
MANN, M ;
FENN, JB .
ZEITSCHRIFT FUR PHYSIK D-ATOMS MOLECULES AND CLUSTERS, 1988, 10 (2-3) :361-368
[7]   Comparison of CID spectra of singly charged polypeptide antibiotic precursor ions obtained by positive-ion vacuum MALDI IT/RTOF and TOF/RTOF, AP-MALDI-IT and ESI-IT mass spectrometry [J].
Pittenauer, E ;
Zehl, M ;
Belgacem, O ;
Raptakis, E ;
Mistrik, R ;
Allmaier, G .
JOURNAL OF MASS SPECTROMETRY, 2006, 41 (04) :421-447
[8]   ELECTROSPRAY ION-SOURCE - ANOTHER VARIATION ON THE FREE-JET THEME [J].
YAMASHITA, M ;
FENN, JB .
JOURNAL OF PHYSICAL CHEMISTRY, 1984, 88 (20) :4451-4459