Anomalous radial migration of single DNA molecules in capillary electrophoresis

被引:67
作者
Zheng, JJ
Yeung, ES [1 ]
机构
[1] Iowa State Univ, Ames Lab, USDOE, Ames, IA 50011 USA
[2] Iowa State Univ, Dept Chem, Ames, IA 50011 USA
关键词
D O I
10.1021/ac0257344
中图分类号
O65 [分析化学];
学科分类号
070302 ; 081704 ;
摘要
We report the unexpected radial migration of DNA molecules in capillary electrophoresis (CE) with applied Poiseuille flow. Such movement can contribute to anomalous migration times, peak dispersion, and size and shape selectivity in CE. When Poiseuille flow is applied from the cathode to the anode, DNA molecules move toward the center of the capillary, forming a narrow, highly concentrated zone. Conversely, when the flow is applied from the anode to the cathode, DNA molecules move toward the walls, leaving a DNA-depleted zone around the axis. We showed that the deformation and orientation of DNA molecules under Poiseuille flow was responsible for the radial migration. By analyzing the forces acting on the deformed and oriented DNA molecules, we derived an expression for the radial lift force, which explained our results very well under different conditions with Poiseuille flow only, electrophoresis only, and the combination of Poiseuille flow and electrophoresis. Factors governing the direction and velocity of radial migration were elucidated. Potential applications of this phenomenon include an alternative to sheath flow in flow cytometry, improving precision and reliability of single-molecule detection, reduction of wall adsorption, and size separation with a mechanism akin to field-flow fractionation. On the negative side, nonuniform electroosmotic flow along the capillary or microfluidic channel is common in CE, and radial migration of certain analytes cannot be neglected.
引用
收藏
页码:4536 / 4547
页数:12
相关论文
共 38 条
[21]   ELECTROKINETIC FLOW IN A NARROW CYLINDRICAL CAPILLARY [J].
RICE, CL ;
WHITEHEAD, R .
JOURNAL OF PHYSICAL CHEMISTRY, 1965, 69 (11) :4017-+
[22]   THE TRANSVERSE FORCE ON A SPINNING SPHERE MOVING IN A VISCOUS FLUID [J].
RUBINOW, SI ;
KELLER, JB .
JOURNAL OF FLUID MECHANICS, 1961, 11 (03) :447-459
[23]   LIFT ON A SMALL SPHERE IN A SLOW SHEAR FLOW [J].
SAFFMAN, PG .
JOURNAL OF FLUID MECHANICS, 1965, 22 :385-&
[24]   BEHAVIOUR OF MACROSCOPIC RIGID SPHERES IN POISEUILLE FLOW .2. EXPERIMENTAL RESULTS AND INTERPRETATION [J].
SEGRE, G ;
SILBERBERG, A .
JOURNAL OF FLUID MECHANICS, 1962, 14 (01) :136-157
[25]   BEHAVIOUR OF MACROSCOPIC RIGID SPHERES IN POISEUILLE FLOW .1. DETERMINATION OF LOCAL CONCENTRATION BY STATISTICAL ANALYSIS OF PARTICLE PASSAGES THROUGH CROSSED LIGHT BEAMS [J].
SEGRE, G ;
SILBERBERG, A .
JOURNAL OF FLUID MECHANICS, 1962, 14 (01) :115-135
[26]   RADIAL PARTICLE DISPLACEMENTS IN POISEUILLE FLOW OF SUSPENSIONS [J].
SEGRE, G ;
SILBERBERG, A .
NATURE, 1961, 189 (476) :209-&
[27]   High throughput single-molecule DNA screening based be electrophoresis [J].
Shortreed, MR ;
Li, HL ;
Huang, WH ;
Yeung, ES .
ANALYTICAL CHEMISTRY, 2000, 72 (13) :2879-2885
[28]   Effect of Flow on Complex Biological Macromolecules in Microfluidic Devices [J].
Shrewsbury, Polly J. ;
Muller, Susan J. ;
Liepmann, Dorian .
BIOMEDICAL MICRODEVICES, 2001, 3 (03) :225-238
[29]   Single-polymer dynamics in steady shear flow [J].
Smith, DE ;
Babcock, HP ;
Chu, S .
SCIENCE, 1999, 283 (5408) :1724-1727
[30]   Response of flexible polymers to a sudden elongational flow [J].
Smith, DE ;
Chu, S .
SCIENCE, 1998, 281 (5381) :1335-1340