Glaciecola nitratireducens sp nov., isolated from seawater

被引:39
作者
Baik, Keun Sik
Park, Yoon-Dong
Seong, Chi Nam
Kim, Eun Mi
Bae, Kyung Sook
Chun, Jongsik
机构
[1] Seoul Natl Univ, Sch Biol Sci, Seoul 151742, South Korea
[2] Seoul Natl Univ, Inst Microbiol, Seoul 151742, South Korea
[3] Sunchon Natl Univ, Coll Nat Sci, Dept Biol, Sunchon, South Korea
[4] Kwangyang Hlth Coll, Dept Dent Hyg, Kwangyang 545703, South Korea
[5] Korea Res Inst Biosci & Biotechnol, Taejon 305600, South Korea
关键词
D O I
10.1099/ijs.0.64330-0
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A marine bacterial strain, FR1064(T), was isolated from a surface seawater sample collected off Jeju Island, South Korea. Phylogenetic analysis based on 16S rRNA gene sequences indicated that the isolate belonged to the Gammaproteobacteria and was related to the genus Glaciecola with 97 center dot 6 % sequence similarity to Glaciecola pallidula, its nearest phylogenetic neighbour. DNA-DNA relatedness between strain FR1064(T) and G. pallidula ACAM 615(T) was 55 %. Cells of the novel isolate were Gram-negative, aerobic, rod-shaped, motile and halophilic, with an optimum sea salts concentration of 4-7 %. The major fatty acids were straight-chain saturated (C16: 0), summed feature 3 and monounsaturated fatty acid C-18:1. The DNA G + C content was 44 mol%. Several phenotypic characteristics differentiated the novel isolate from all previously described members of the genus Glaciecola. The polyphasic data obtained in this study clearly demonstrate that strain FR1064(T) represents a novel species of the genus Glaciecola. The name Glaciecola nitratireducens sp. nov. is therefore proposed, with strain FR1064(T) (=KCTC 12276(T)=JCM 12485(T)) as the type strain.
引用
收藏
页码:2185 / 2188
页数:4
相关论文
共 20 条
[1]   Glaciecola punicea gen. nov., sp. nov. and Glaciecola pallidula gen. nov., sp. nov.:: psychrophilic bacteria from Antarctic sea-ice habitats [J].
Bowman, JP ;
McCammon, SA ;
Brown, JL ;
McMeekin, TA .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1998, 48 :1213-1222
[2]   A PHYLOGENETIC ANALYSIS OF THE GENUS NOCARDIA WITH 16S RIBOSOMAL-RNA GENE-SEQUENCES [J].
CHUN, JS ;
GOODFELLOW, M .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1995, 45 (02) :240-245
[3]   EVOLUTIONARY TREES FROM DNA-SEQUENCES - A MAXIMUM-LIKELIHOOD APPROACH [J].
FELSENSTEIN, J .
JOURNAL OF MOLECULAR EVOLUTION, 1981, 17 (06) :368-376
[4]  
FELSENSTEIN J, 1985, EVOLUTION, V39, P783, DOI 10.1111/j.1558-5646.1985.tb00420.x
[5]   TOWARD DEFINING COURSE OF EVOLUTION - MINIMUM CHANGE FOR A SPECIFIC TREE TOPOLOGY [J].
FITCH, WM .
SYSTEMATIC ZOOLOGY, 1971, 20 (04) :406-&
[6]   COLLECTION OF SMALL-SUBUNIT (16S- AND 16S-LIKE) RIBOSOMAL-RNA STRUCTURES - 1994 [J].
GUTELL, RR .
NUCLEIC ACIDS RESEARCH, 1994, 22 (17) :3502-3507
[7]   jPHYDIT: a JAVA']JAVA-based integrated environment for molecular phylogeny of ribosomal RNA sequences [J].
Jeon, YS ;
Chung, HW ;
Park, S ;
Hur, I ;
Lee, JH ;
Chun, J .
BIOINFORMATICS, 2005, 21 (14) :3171-3173
[8]  
Jukes TH, 1969, MAMMALIAN PROTEIN ME, P21, DOI [DOI 10.1016/B978-1-4832-3211-9.50009-7, DOI 10.1093/BIOINFORMATICS/BTM404]
[9]   Reduction of the biogenic amine contents in low salt-fermented soybean paste by gamma irradiation [J].
Kim, JH ;
Kim, DH ;
Ahn, HJ ;
Park, HJ ;
Byun, MW .
FOOD CONTROL, 2005, 16 (01) :43-49
[10]   IDENTIFICATION OF PSEUDOMONAS-PYOCYANEA BY THE OXIDASE REACTION [J].
KOVACS, N .
NATURE, 1956, 178 (4535) :703-703